Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1271c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,419,003	+				+1.0
1,419,339	+		Rv1270c	0.44	-1.1
1,419,414	+		Rv1270c	0.54	-0.4
1,419,414	+		Rv1270c	0.54	+0.0
1,419,414	+		Rv1270c	0.54	+1.0
1,419,962	+				-0.0
1,419,992	+				-0.4
1,420,019	+		Rv1271c	0.17	+0.4
1,420,032	+		Rv1271c	0.21	+1.0
1,420,387	+				-1.3
1,420,429	+				-0.2
1,420,680	-		Rv1272c	0.14	-1.2
1,420,794	+		Rv1272c	0.20	-0.7
1,420,794	+		Rv1272c	0.20	-0.4
1,420,797	+		Rv1272c	0.20	-0.1
1,420,858	+		Rv1272c	0.24	-0.2
1,421,089	+		Rv1272c	0.36	+0.2
1,421,089	+		Rv1272c	0.36	-0.4
1,421,089	+		Rv1272c	0.36	-0.6