Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1070c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,193,345	-		Rv1069c	0.47	+1.8
1,193,345	-		Rv1069c	0.47	-0.9
1,193,345	-		Rv1069c	0.47	-0.6
1,193,405	+		Rv1069c	0.51	+0.6
1,193,406	-		Rv1069c	0.51	+1.0
1,193,822	+		Rv1069c	0.74	-0.5
1,193,823	-		Rv1069c	0.74	-0.4
1,193,848	+		Rv1069c	0.76	-0.3
1,193,849	-		Rv1069c	0.76	-0.2
1,193,979	-		Rv1069c	0.83	-0.3
1,193,979	-		Rv1069c	0.83	+0.2
1,193,979	-		Rv1069c	0.83	-0.1
1,193,979	-		Rv1069c	0.83	-1.2
1,194,014	+		Rv1069c	0.85	+0.2
1,194,317	+				-0.4
1,194,317	+				-0.2
1,194,370	+		Rv1070c	0.13	-0.3
1,194,370	+		Rv1070c	0.13	-0.7
1,194,371	-		Rv1070c	0.13	-0.6
1,194,584	+		Rv1070c	0.41	-0.7
1,194,648	+		Rv1070c	0.49	-0.5
1,194,734	-		Rv1070c	0.60	-0.3
1,194,995	+				-0.4
1,195,049	-				+0.2
1,195,057	-				+0.2
1,195,225	-		Rv1071c	0.16	-0.1
1,195,225	-		Rv1071c	0.16	+0.6
1,195,225	-		Rv1071c	0.16	+1.0
1,195,248	-		Rv1071c	0.19	+2.0
1,195,337	+		Rv1071c	0.27	+0.2
1,195,639	-		Rv1071c	0.56	-1.3
1,195,639	-		Rv1071c	0.56	+0.3
1,195,699	+		Rv1071c	0.62	-0.6
1,195,699	+		Rv1071c	0.62	-2.5
1,195,754	+		Rv1071c	0.67	+0.2
1,195,755	-		Rv1071c	0.67	+0.1
1,195,779	+		Rv1071c	0.70	+1.0
1,195,818	+		Rv1071c	0.74	+0.2
1,195,872	+		Rv1071c	0.79	-1.0