Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0964c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
1,075,241	+				+0.3
1,075,275	+				+0.0
1,075,298	+				+0.8
1,075,298	+				-0.2
1,075,425	+		Rv0963c	0.16	+0.3
1,075,425	+		Rv0963c	0.16	-1.1
1,075,425	+		Rv0963c	0.16	-0.1
1,075,457	+		Rv0963c	0.20	+0.3
1,075,458	-		Rv0963c	0.20	-1.2
1,075,523	+		Rv0963c	0.28	-0.3
1,075,524	-		Rv0963c	0.28	+0.1
1,075,728	-		Rv0963c	0.54	+0.4
1,075,760	+		Rv0963c	0.58	-0.3
1,075,761	-		Rv0963c	0.58	+0.5
1,075,993	-		Rv0963c	0.87	-1.4
1,076,474	-		Rv0964c	0.58	-0.4
1,076,520	+		Rv0964c	0.67	+0.4
1,076,521	-		Rv0964c	0.67	+0.9
1,076,631	+				-0.4
1,076,632	-				-0.2
1,076,784	-				-0.2
1,076,784	-				+0.5
1,076,899	+		Rv0965c	0.29	+0.5
1,076,899	+		Rv0965c	0.29	-0.3
1,077,121	+		Rv0965c	0.82	+2.7
1,077,121	+		Rv0965c	0.82	-0.1
1,077,122	-		Rv0965c	0.82	+0.4
1,077,122	-		Rv0965c	0.82	-0.7
1,077,617	+		Rv0966c	0.64	+0.2
1,077,618	-		Rv0966c	0.64	+0.9
1,077,663	+		Rv0966c	0.71	-0.1
1,077,678	+		Rv0966c	0.74	+0.1