Experiment: 7H9 with Streptomycin 0.178 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0242c and Rv0243 are separated by 141 nucleotides Rv0243 and Rv0244c are separated by 304 nucleotides
Rv0242c: Rv0242c - Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG4 (3-ketoacyl-acyl carrier protein reductase), at 290,665 to 292,029
Rv0242c
Rv0243: Rv0243 - Probable acetyl-CoA acyltransferase FadA2 (3-ketoacyl-CoA thiolase) (beta-ketothiolase), at 292,171 to 293,493
Rv0243
Rv0244c: Rv0244c - Probable acyl-CoA dehydrogenase FadE5, at 293,798 to 295,633
Rv0244c
Position (kb) 292
293
294 Strain fitness (log2 ratio) -2
-1
0
1
2 at 291.467 kb on + strand, within Rv0242c at 291.546 kb on - strand, within Rv0242c at 291.546 kb on - strand, within Rv0242c at 291.546 kb on - strand, within Rv0242c at 291.712 kb on - strand, within Rv0242c at 291.828 kb on - strand, within Rv0242c at 292.071 kb on + strand at 292.072 kb on - strand at 292.077 kb on + strand at 292.077 kb on + strand at 292.078 kb on - strand at 292.078 kb on - strand at 292.078 kb on - strand at 292.093 kb on + strand at 292.094 kb on - strand at 292.099 kb on - strand at 292.121 kb on + strand at 292.121 kb on + strand at 292.122 kb on - strand at 292.124 kb on + strand at 292.124 kb on + strand at 292.125 kb on - strand at 292.220 kb on + strand at 292.398 kb on - strand, within Rv0243 at 292.398 kb on - strand, within Rv0243 at 292.435 kb on + strand, within Rv0243 at 292.804 kb on - strand, within Rv0243 at 293.053 kb on + strand, within Rv0243 at 293.053 kb on + strand, within Rv0243 at 293.053 kb on + strand, within Rv0243 at 293.054 kb on - strand, within Rv0243 at 293.086 kb on + strand, within Rv0243 at 293.087 kb on - strand, within Rv0243 at 293.182 kb on + strand, within Rv0243 at 293.182 kb on + strand, within Rv0243 at 293.182 kb on + strand, within Rv0243 at 293.248 kb on + strand, within Rv0243 at 293.508 kb on + strand at 293.508 kb on + strand at 293.793 kb on - strand at 293.793 kb on - strand at 293.793 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Streptomycin 0.178 ug/mL remove 291,467 + Rv0242c 0.59 +1.0 291,546 - Rv0242c 0.65 -2.3 291,546 - Rv0242c 0.65 -0.3 291,546 - Rv0242c 0.65 -0.9 291,712 - Rv0242c 0.77 -1.3 291,828 - Rv0242c 0.85 +0.0 292,071 + -0.6 292,072 - +0.0 292,077 + -0.4 292,077 + -1.0 292,078 - -0.5 292,078 - -1.0 292,078 - -0.1 292,093 + -0.9 292,094 - +0.4 292,099 - +0.4 292,121 + +0.1 292,121 + +0.0 292,122 - -0.2 292,124 + -1.0 292,124 + -0.4 292,125 - +0.5 292,220 + +0.3 292,398 - Rv0243 0.17 -1.0 292,398 - Rv0243 0.17 -1.0 292,435 + Rv0243 0.20 -1.2 292,804 - Rv0243 0.48 +2.0 293,053 + Rv0243 0.67 -0.9 293,053 + Rv0243 0.67 -0.6 293,053 + Rv0243 0.67 -1.5 293,054 - Rv0243 0.67 -0.8 293,086 + Rv0243 0.69 -0.6 293,087 - Rv0243 0.69 -1.1 293,182 + Rv0243 0.76 -0.6 293,182 + Rv0243 0.76 -1.2 293,182 + Rv0243 0.76 -0.6 293,248 + Rv0243 0.81 -1.3 293,508 + +0.5 293,508 + +0.1 293,793 - -0.5 293,793 - +1.3 293,793 - -0.5
Or see this region's nucleotide sequence