Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0118c

Experiment: 7H9 with Streptomycin 0.178 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Streptomycin 0.178 ug/mL
141,160	+				-0.0
141,222	-				-0.2
141,275	+				-0.5
141,370	+		Rv0117	0.18	+0.2
141,397	-		Rv0117	0.21	+1.6
141,411	+		Rv0117	0.22	+1.0
141,684	-		Rv0117	0.51	-0.2
141,696	-		Rv0117	0.52	+0.3
141,769	-		Rv0117	0.60	+0.1
141,936	+		Rv0117	0.78	+0.7
142,027	+		Rv0117	0.88	-0.4
142,071	+				-0.1
142,072	-				-0.8
143,010	+		Rv0118c	0.50	+0.7
143,367	-		Rv0118c	0.71	+0.6
143,376	+		Rv0118c	0.71	+0.3
143,377	-		Rv0118c	0.71	+0.2
143,458	+		Rv0118c	0.76	+0.1
143,925	+				-0.7
143,925	+				-0.2
143,926	-				-0.2
143,968	-				-0.4