Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3346c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
3,742,340	-				+0.2
3,742,340	-				-0.2
3,742,512	+				-0.5
3,742,512	+				+0.4
3,742,512	+				-0.4
3,742,513	-				+0.3
3,742,513	-				-0.3
3,742,513	-				+1.8
3,742,587	+				-0.2
3,742,587	+				+0.3
3,742,588	-				+0.4
3,742,924	+				-1.6
3,742,924	+				-1.6
3,742,924	+				-0.1
3,742,924	+				-1.9
3,742,925	-				+0.8
3,742,965	+				+0.1
3,743,001	+				-0.7
3,743,043	+				-0.3
3,743,044	-				+0.6
3,743,061	+				-0.2
3,743,061	+				-1.2
3,743,119	+				+0.3
3,743,119	+				+0.2
3,743,120	-				+0.8
3,743,120	-				+0.4
3,743,190	-				+1.8
3,743,190	-				-0.8
3,743,234	-		Rv3346c	0.14	+0.8
3,743,234	-		Rv3346c	0.14	+0.1
3,743,234	-		Rv3346c	0.14	+1.6
3,743,525	+				+0.8
3,743,525	+				+0.4
3,743,526	-				+0.4
3,743,526	-				+0.8
3,743,526	-				+0.1
3,743,602	+				-0.6
3,743,602	+				+0.7
3,743,602	+				+0.2
3,743,603	-				-0.8
3,743,603	-				-0.2
3,743,603	-				-0.3
3,743,603	-				+2.8
3,743,603	-				+0.3
3,743,603	-				+1.3
3,743,610	-				-0.0
3,743,764	+				+0.1
3,743,764	+				-0.8
3,743,764	+				-0.5
3,743,764	+				+0.3
3,743,765	-				-0.7
3,743,765	-				-0.7
3,744,083	+				+0.4
3,744,083	+				+1.3
3,744,083	+				-0.0
3,744,084	-				+0.2
3,744,084	-				+0.3
3,744,084	-				-0.2
3,744,320	+				+0.3
3,744,320	+				-0.2
3,744,321	-				-0.2
3,744,321	-				+0.0
3,744,446	+				+0.5
3,744,447	-				+2.3