Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2976c
Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with para-aminosalicylic 0.086 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,331,166 | + | Rv2974c | 0.86 | +0.2 | |
3,331,442 | + | Rv2975c | 0.33 | +0.7 | |
3,331,442 | + | Rv2975c | 0.33 | +1.4 | |
3,331,613 | + | -2.1 | |||
3,331,613 | + | -0.8 | |||
3,331,614 | - | -0.4 | |||
3,331,614 | - | -0.5 | |||
3,331,614 | - | +0.5 | |||
3,331,668 | + | -0.5 | |||
3,331,669 | - | +0.3 | |||
3,332,518 | - | Rv2976c | 0.65 | -1.4 | |
3,332,631 | - | Rv2976c | 0.82 | +0.9 | |
3,332,770 | + | +0.0 |
Or see this region's nucleotide sequence