Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2921c
Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with para-aminosalicylic 0.086 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,231,909 | + | Rv2920c | 0.58 | +0.7 | |
3,232,176 | + | Rv2920c | 0.77 | -1.0 | |
3,232,251 | - | Rv2920c | 0.82 | -0.3 | |
3,232,310 | + | Rv2920c | 0.86 | -0.7 | |
3,232,311 | - | Rv2920c | 0.86 | -0.1 | |
3,232,311 | - | Rv2920c | 0.86 | -1.5 | |
3,232,401 | - | -0.5 | |||
3,232,583 | - | -0.4 | |||
3,232,583 | - | +0.9 | |||
3,232,583 | - | +1.7 | |||
3,234,191 | - | +0.4 | |||
3,234,277 | - | -0.8 | |||
3,234,284 | - | -0.5 | |||
3,235,017 | + | Rv2922c | 0.23 | -0.3 | |
3,235,018 | - | Rv2922c | 0.23 | -0.6 |
Or see this region's nucleotide sequence