Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2782c
Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with para-aminosalicylic 0.086 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,088,173 | + | Rv2781c | 0.22 | -0.8 | |
3,088,174 | - | Rv2781c | 0.22 | -0.1 | |
3,088,521 | + | Rv2781c | 0.55 | +0.9 | |
3,088,675 | - | Rv2781c | 0.70 | +0.3 | |
3,088,701 | + | Rv2781c | 0.73 | +0.3 | |
3,088,702 | - | Rv2781c | 0.73 | +0.0 | |
3,088,704 | + | Rv2781c | 0.73 | +0.3 | |
3,088,705 | - | Rv2781c | 0.73 | -0.3 | |
3,088,735 | - | Rv2781c | 0.76 | +0.5 | |
3,088,857 | + | Rv2781c | 0.88 | +0.9 | |
3,089,217 | + | Rv2782c | 0.13 | +1.1 | |
3,089,410 | - | Rv2782c | 0.28 | +1.8 | |
3,090,063 | + | Rv2782c | 0.77 | -0.4 | |
3,090,063 | + | Rv2782c | 0.77 | +0.2 | |
3,090,067 | - | Rv2782c | 0.78 | -0.4 | |
3,090,366 | - | -0.4 |
Or see this region's nucleotide sequence