Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2743c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
3,055,486	-				-0.3
3,055,781	+		Rv2742c	0.32	+0.2
3,055,919	-		Rv2742c	0.48	-0.8
3,055,932	+		Rv2742c	0.50	+0.7
3,055,932	+		Rv2742c	0.50	+0.1
3,055,940	+		Rv2742c	0.51	-0.5
3,055,941	-		Rv2742c	0.51	+0.2
3,055,941	-		Rv2742c	0.51	+0.3
3,056,006	+		Rv2742c	0.59	+0.7
3,056,061	+		Rv2742c	0.65	+0.5
3,056,061	+		Rv2742c	0.65	-0.6
3,056,061	+		Rv2742c	0.65	+0.2
3,056,061	+		Rv2742c	0.65	-0.1
3,056,062	-		Rv2742c	0.66	+0.2
3,056,062	-		Rv2742c	0.66	+0.6
3,056,062	-		Rv2742c	0.66	-0.2
3,056,070	+		Rv2742c	0.67	-0.1
3,056,077	-		Rv2742c	0.67	+0.7
3,056,266	-				+0.8
3,056,290	+				+0.3
3,056,291	-				+0.2
3,056,291	-				-0.1
3,056,382	+				+0.2
3,056,383	-				+0.3
3,056,383	-				+0.2
3,056,385	-				+1.3
3,056,385	-				+0.2
3,056,643	+		Rv2743c	0.27	+0.1
3,056,643	+		Rv2743c	0.27	+0.5
3,056,644	-		Rv2743c	0.28	+0.0
3,056,745	-		Rv2743c	0.40	+0.2
3,056,942	+		Rv2743c	0.64	-0.6
3,056,942	+		Rv2743c	0.64	+0.5
3,056,942	+		Rv2743c	0.64	+0.3
3,056,943	-		Rv2743c	0.64	+0.3
3,056,943	-		Rv2743c	0.64	+0.0
3,057,065	+		Rv2743c	0.79	+0.6
3,057,252	+				-0.3
3,057,252	+				-0.2
3,057,252	+				-0.1
3,057,253	-				+0.7
3,057,253	-				+0.2
3,057,278	-				+0.2
3,057,771	+		Rv2744c	0.64	+0.7
3,057,771	+		Rv2744c	0.64	-0.3
3,057,772	-		Rv2744c	0.64	+0.2
3,058,032	+				-0.0
3,058,032	+				-0.8
3,058,033	-				+0.2
3,058,033	-				-0.6
3,058,046	-				-0.5
3,058,194	+				-0.0
3,058,195	-				+0.7