Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2035

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
2,280,748	+		Rv2033c	0.60	+0.1
2,280,877	-		Rv2033c	0.76	-0.1
2,280,880	+		Rv2033c	0.76	+0.5
2,281,090	+				-0.1
2,281,090	+				-0.0
2,281,090	+				+0.0
2,281,091	-				-1.1
2,281,155	-				-0.4
2,281,785	-		Rv2035	0.35	+0.0
2,281,788	+		Rv2035	0.36	-0.3
2,281,839	+		Rv2035	0.46	-0.1
2,281,840	-		Rv2035	0.46	-0.6
2,281,861	+		Rv2035	0.51	+1.5
2,282,055	+				-0.0
2,282,056	-				-0.6
2,282,059	+				-1.4
2,282,068	-				-0.1
2,282,070	-				-0.7
2,282,166	+		Rv2036	0.10	-1.9
2,282,748	+				-0.9
2,282,788	-				-0.0