Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1735c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,960,605	-				-0.0
1,960,715	+				+0.0
1,960,716	-				+0.8
1,960,716	-				+0.0
1,960,719	+				+1.3
1,960,735	+				-0.7
1,960,735	+				-1.1
1,960,783	+				-0.1
1,961,120	-				+0.3
1,961,171	-				+0.2
1,961,292	+				+0.4
1,961,538	+		Rv1735c	0.50	+0.4
1,961,539	-		Rv1735c	0.50	-0.3
1,961,539	-		Rv1735c	0.50	-0.1
1,961,596	-		Rv1735c	0.61	+0.9
1,961,631	-		Rv1735c	0.68	+0.1
1,961,832	+				+0.1
1,961,888	+				-1.0
1,961,889	-				+0.2
1,961,889	-				+0.1
1,961,899	+				-0.0
1,961,899	+				-0.1
1,961,969	-				+0.2
1,962,036	-				+0.2
1,962,077	+				-0.1
1,962,280	+				+0.1
1,962,281	-				-2.2
1,962,391	+				-0.0
1,962,394	+				-0.0
1,962,481	+		Rv1736c	0.13	+0.4
1,962,481	+		Rv1736c	0.13	-0.3
1,962,481	+		Rv1736c	0.13	+0.2
1,962,556	+		Rv1736c	0.17	-0.7
1,962,689	-		Rv1736c	0.24	-0.5
1,962,689	-		Rv1736c	0.24	-2.1