Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1528c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,727,982	-				-0.6
1,727,991	+				-0.4
1,727,992	-				+1.9
1,728,228	+				+1.2
1,728,228	+				+0.4
1,728,228	+				-0.3
1,728,229	-				+0.1
1,728,347	-				-0.8
1,728,538	+				-0.0
1,728,554	+				-0.2
1,728,555	-				+0.4
1,728,555	-				-0.2
1,728,557	-				+0.7
1,728,557	-				+1.2
1,728,677	+				-0.4
1,728,677	+				-1.0
1,728,678	-				-0.6
1,728,755	+				-0.1
1,728,793	-				+0.1
1,729,023	+		Rv1528c	0.14	+0.7
1,729,193	+		Rv1528c	0.48	-0.7
1,729,194	-		Rv1528c	0.48	+0.3
1,729,194	-		Rv1528c	0.48	+0.0
1,729,194	-		Rv1528c	0.48	-0.4
1,729,285	+		Rv1528c	0.67	+0.2
1,729,286	-		Rv1528c	0.67	+0.4
1,729,286	-		Rv1528c	0.67	-0.1
1,729,574	+				+2.3
1,729,574	+				+0.2
1,729,574	+				-0.3
1,729,763	-		Rv1529	0.15	+0.0
1,729,763	-		Rv1529	0.15	+0.6
1,729,824	+		Rv1529	0.18	-0.0
1,730,194	-		Rv1529	0.39	+0.2
1,730,194	-		Rv1529	0.39	+1.2
1,730,226	+		Rv1529	0.41	+0.4
1,730,227	-		Rv1529	0.41	+0.1
1,730,227	-		Rv1529	0.41	-0.1
1,730,281	-		Rv1529	0.44	-0.4
1,730,281	-		Rv1529	0.44	-0.5
1,730,296	+		Rv1529	0.45	-1.3
1,730,350	+		Rv1529	0.48	-0.3
1,730,351	-		Rv1529	0.48	-0.1