Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1490

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,678,540	+				-0.1
1,678,541	-				-1.9
1,678,541	-				-0.3
1,678,579	+				-0.1
1,678,579	+				-1.1
1,678,587	-				+0.3
1,678,642	-		Rv1489	0.25	-0.1
1,678,642	-		Rv1489	0.25	-1.0
1,678,642	-		Rv1489	0.25	-0.3
1,678,642	-		Rv1489	0.25	-0.4
1,678,787	-		Rv1489	0.66	+0.1
1,678,837	-		Rv1489	0.80	-0.3
1,678,906	+				+0.0
1,678,906	+				-0.8
1,678,906	+				+0.0
1,678,907	-				-1.0
1,678,907	-				-0.3
1,678,930	+				+2.3
1,678,931	-				-0.2
1,679,190	+				+0.7
1,679,190	+				-0.8
1,679,217	-				-0.3
1,679,558	-		Rv1490	0.18	+0.0
1,679,622	+		Rv1490	0.23	+0.7
1,679,773	-		Rv1490	0.34	+0.2
1,680,156	+		Rv1490	0.64	+0.1
1,680,342	+		Rv1490	0.78	+0.6
1,680,499	-				+1.1
1,680,499	-				-0.5
1,680,499	-				+0.6
1,680,670	-				-0.0
1,680,670	-				+0.1
1,680,718	+				+0.3
1,680,718	+				-0.3
1,680,718	+				+0.3
1,680,719	-				+0.5
1,680,719	-				-0.1
1,680,721	+				-0.3
1,680,722	-				-0.7
1,680,931	-				+0.5
1,680,948	+				-0.1
1,680,948	+				+0.8
1,680,948	+				+0.7
1,680,949	-				-0.4
1,680,964	+				+0.0
1,680,964	+				+0.6
1,680,964	+				-0.7
1,680,964	+				-0.5
1,680,989	-				-0.0
1,681,038	+				+0.7
1,681,039	-				-0.1
1,681,065	+				+0.1
1,681,066	-				-0.8
1,681,207	-				+0.2
1,681,242	+				-0.3
1,681,273	-				+1.5
1,681,323	-		Rv1491c	0.15	-0.5
1,681,323	-		Rv1491c	0.15	-1.5
1,681,464	+		Rv1491c	0.34	-0.5
1,681,464	+		Rv1491c	0.34	-0.3
1,681,465	-		Rv1491c	0.34	+0.2
1,681,465	-		Rv1491c	0.34	-0.2