Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1361c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,531,593	-		Rv1360	0.24	-0.8
1,531,593	-		Rv1360	0.24	+0.6
1,531,777	+		Rv1360	0.42	-1.6
1,531,778	-		Rv1360	0.42	-0.3
1,531,914	+		Rv1360	0.55	-0.1
1,531,914	+		Rv1360	0.55	-0.1
1,531,914	+		Rv1360	0.55	-1.4
1,531,914	+		Rv1360	0.55	-0.1
1,531,914	+		Rv1360	0.55	+0.6
1,531,915	-		Rv1360	0.55	+0.2
1,531,930	+		Rv1360	0.57	-0.7
1,531,962	-		Rv1360	0.60	-0.4
1,532,092	+		Rv1360	0.73	+0.3
1,532,093	-		Rv1360	0.73	-0.7
1,532,093	-		Rv1360	0.73	+0.7
1,532,110	+		Rv1360	0.74	-0.3
1,532,337	+				+0.1
1,532,338	-				+1.5
1,532,338	-				+0.1
1,532,340	+				-0.3
1,532,413	+				-0.5
1,532,470	+				-0.3
1,532,470	+				+0.3
1,532,471	-				-1.2
1,532,471	-				-0.4
1,532,471	-				-0.3
1,532,471	-				-0.4
1,532,474	+				+0.5
1,532,474	+				-0.2
1,532,474	+				+0.3
1,532,505	+				+0.7
1,532,506	-				-0.0
1,533,457	+		Rv1361c	0.85	+0.5
1,533,658	+				+0.0
1,533,662	+				-0.3
1,533,663	-				-0.5
1,533,717	-				+2.3
1,533,798	+				-1.0
1,533,798	+				+0.0
1,533,939	+				-0.6
1,533,949	+				-0.2
1,533,950	-				-0.8
1,533,950	-				-0.4
1,533,996	+				+0.3
1,534,046	+		Rv1362c	0.15	-1.5
1,534,047	-		Rv1362c	0.15	+0.1
1,534,099	-		Rv1362c	0.23	-0.4
1,534,193	-		Rv1362c	0.37	+0.0
1,534,360	+		Rv1362c	0.62	+0.3
1,534,361	-		Rv1362c	0.62	+0.3
1,534,363	-		Rv1362c	0.63	-0.1
1,534,597	-				+0.3