Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0836c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
931,337	+		Rv0835	0.60	-0.9
931,419	-		Rv0835	0.72	-0.9
931,490	+		Rv0835	0.83	+0.7
931,490	+		Rv0835	0.83	+0.7
931,490	+		Rv0835	0.83	-0.4
931,491	-		Rv0835	0.83	-0.5
931,491	-		Rv0835	0.83	+0.2
931,509	+		Rv0835	0.86	+0.6
931,509	+		Rv0835	0.86	+0.7
931,515	+		Rv0835	0.87	-0.4
931,516	-		Rv0835	0.87	-0.3
931,534	+				-0.0
931,595	+				+0.1
931,596	-				-0.0
931,738	+				-0.1
931,739	-				+0.6
931,752	+				-0.3
931,752	+				+0.9
931,752	+				-0.5
931,753	-				-0.5
931,753	-				+1.3
931,753	-				+0.4
931,753	-				-0.0
931,824	+				+0.4
931,825	-				-0.1
931,825	-				-0.5
932,052	+				-0.6
932,073	+				-1.3
932,140	+				+0.0
932,164	+				-0.8
932,165	-				-0.6
932,186	+				-0.3
932,187	-				+0.5
932,187	-				+0.4
932,211	+				-1.6
932,212	-				-1.0
932,420	+		Rv0836c	0.22	+0.9
932,420	+		Rv0836c	0.22	-0.3
932,420	+		Rv0836c	0.22	+1.2
932,490	+		Rv0836c	0.32	+0.0
932,529	+		Rv0836c	0.38	-0.7
932,529	+		Rv0836c	0.38	-0.3
932,530	-		Rv0836c	0.38	+1.7
932,580	+		Rv0836c	0.46	+0.7
932,580	+		Rv0836c	0.46	+0.7
932,581	-		Rv0836c	0.46	-0.6
932,581	-		Rv0836c	0.46	-1.1
932,646	+		Rv0836c	0.56	-1.9
932,903	+				+0.7
933,091	+				+0.7
933,198	+		Rv0837c	0.19	+0.3
933,198	+		Rv0837c	0.19	+0.7
933,199	-		Rv0837c	0.19	+0.5
933,201	-		Rv0837c	0.19	-0.6
933,241	+		Rv0837c	0.23	+0.2
933,242	-		Rv0837c	0.23	-0.1
933,242	-		Rv0837c	0.23	-0.6
933,242	-		Rv0837c	0.23	+0.0
933,479	+		Rv0837c	0.46	+0.3
933,479	+		Rv0837c	0.46	+0.2
933,480	-		Rv0837c	0.46	-0.2
933,480	-		Rv0837c	0.46	-0.1
933,480	-		Rv0837c	0.46	+0.3
933,480	-		Rv0837c	0.46	-0.3
933,480	-		Rv0837c	0.46	+0.1
933,500	+		Rv0837c	0.48	-0.1
933,603	-		Rv0837c	0.58	+0.4
933,718	+		Rv0837c	0.69	+0.2
933,719	-		Rv0837c	0.70	+0.0
933,743	-		Rv0837c	0.72	-1.4
933,874	+		Rv0837c	0.85	-0.2
933,874	+		Rv0837c	0.85	+0.5
933,874	+		Rv0837c	0.85	-0.8
933,875	-		Rv0837c	0.85	-0.4
933,875	-		Rv0837c	0.85	+0.1
933,918	+		Rv0837c	0.89	-0.4
933,919	-		Rv0837c	0.89	+0.2