Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3490

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
3,907,283	-				-0.5
3,907,283	-				+1.0
3,907,285	+				+0.7
3,907,285	+				-0.1
3,907,286	-				-0.2
3,907,383	-				-0.0
3,907,411	+				-0.2
3,907,412	-				+0.0
3,907,412	-				-1.2
3,907,415	+				-0.4
3,907,415	+				+0.5
3,907,415	+				-0.3
3,907,415	+				-0.8
3,907,416	-				-0.4
3,907,559	-				+0.3
3,907,666	+				+0.0
3,907,666	+				-0.3
3,907,667	-				-0.0
3,907,667	-				-0.8
3,907,796	+		Rv3488	0.40	-0.1
3,907,797	-		Rv3488	0.40	-1.2
3,908,061	-				+0.3
3,908,066	+				-0.3
3,908,066	+				-0.5
3,908,070	+				-2.2
3,908,070	+				-0.2
3,908,234	+				-0.0
3,908,234	+				+0.3
3,908,234	+				-0.4
3,908,234	+				-1.0
3,908,234	+				+0.1
3,909,737	-				+1.5
3,909,855	+				-0.4
3,910,084	+		Rv3491	0.34	-0.8
3,910,085	-		Rv3491	0.34	-0.3
3,910,097	+		Rv3491	0.36	+0.9
3,910,148	-		Rv3491	0.45	-0.0
3,910,213	+		Rv3491	0.56	-0.2
3,910,214	-		Rv3491	0.56	-0.2
3,910,214	-		Rv3491	0.56	-0.6
3,910,214	-		Rv3491	0.56	+0.2
3,910,295	+		Rv3491	0.70	+1.1
3,910,296	-		Rv3491	0.70	-0.6