Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2761c and Rv2762c overlap by 4 nucleotides Rv2762c and Rv2763c are separated by 73 nucleotides Rv2763c and Rv2764c are separated by 70 nucleotides
Rv2761c: Rv2761c - Possible type I restriction/modification system specificity determinant HsdS (S protein), at 3,071,546 to 3,072,640
Rv2761c
Rv2762c: Rv2762c - Conserved hypothetical protein, at 3,072,637 to 3,073,056
Rv2762c
Rv2763c: Rv2763c - Dihydrofolate reductase DfrA (DHFR) (tetrahydrofolate dehydrogenase), at 3,073,130 to 3,073,609
Rv2763c
Rv2764c: Rv2764c - Probable thymidylate synthase ThyA (ts) (TSASE), at 3,073,680 to 3,074,471
Rv2764c
Position (kb)
3072
3073
3074 Strain fitness (log2 ratio)
-1
0
1 at 3072.039 kb on + strand, within Rv2761c at 3072.040 kb on - strand, within Rv2761c at 3072.117 kb on + strand, within Rv2761c at 3072.118 kb on - strand, within Rv2761c at 3072.118 kb on - strand, within Rv2761c at 3072.118 kb on - strand, within Rv2761c at 3072.345 kb on + strand, within Rv2761c at 3072.346 kb on - strand, within Rv2761c at 3072.441 kb on + strand, within Rv2761c at 3072.523 kb on - strand, within Rv2761c at 3072.574 kb on + strand at 3072.605 kb on + strand at 3072.611 kb on + strand at 3072.778 kb on + strand, within Rv2762c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with para-aminosalicylic 0.086 ug/mL remove 3,072,039 + Rv2761c 0.45 +0.3 3,072,040 - Rv2761c 0.45 +0.1 3,072,117 + Rv2761c 0.52 -0.6 3,072,118 - Rv2761c 0.52 +0.2 3,072,118 - Rv2761c 0.52 -1.6 3,072,118 - Rv2761c 0.52 +1.0 3,072,345 + Rv2761c 0.73 +0.3 3,072,346 - Rv2761c 0.73 +1.3 3,072,441 + Rv2761c 0.82 +1.6 3,072,523 - Rv2761c 0.89 +0.2 3,072,574 + +0.5 3,072,605 + +0.1 3,072,611 + +1.3 3,072,778 + Rv2762c 0.34 +1.1
Or see this region's nucleotide sequence