Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2609c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
2,935,881	+		Rv2608	0.48	-0.2
2,935,881	+		Rv2608	0.48	-0.2
2,935,882	-		Rv2608	0.48	-0.0
2,935,882	-		Rv2608	0.48	-0.2
2,935,906	-		Rv2608	0.49	-0.0
2,935,913	+		Rv2608	0.50	-0.0
2,935,913	+		Rv2608	0.50	-0.1
2,935,949	+		Rv2608	0.52	-0.0
2,935,957	+		Rv2608	0.52	+1.5
2,936,006	-		Rv2608	0.55	+0.5
2,936,015	+		Rv2608	0.56	+0.1
2,936,015	+		Rv2608	0.56	-0.4
2,936,015	+		Rv2608	0.56	+0.1
2,936,015	+		Rv2608	0.56	+0.4
2,936,016	-		Rv2608	0.56	-0.9
2,936,016	-		Rv2608	0.56	+0.3
2,936,041	-		Rv2608	0.57	-0.4
2,936,124	+		Rv2608	0.62	-0.1
2,936,198	-		Rv2608	0.66	+0.3
2,936,240	-		Rv2608	0.69	-0.5
2,936,306	+		Rv2608	0.72	-0.3
2,936,333	+		Rv2608	0.74	-0.3
2,936,333	+		Rv2608	0.74	+0.1
2,936,360	+		Rv2608	0.75	+0.1
2,936,495	+		Rv2608	0.83	+0.5
2,936,495	+		Rv2608	0.83	+0.2
2,936,495	+		Rv2608	0.83	+1.0
2,936,495	+		Rv2608	0.83	-0.0
2,936,496	-		Rv2608	0.83	+2.0
2,936,496	-		Rv2608	0.83	+1.4
2,936,615	+				-0.4
2,936,773	-				+2.2
2,936,903	+				+0.1
2,936,986	-		Rv2609c	0.17	+0.5
2,937,051	+		Rv2609c	0.23	+0.8
2,937,051	+		Rv2609c	0.23	-0.0
2,937,051	+		Rv2609c	0.23	-0.3
2,937,051	+		Rv2609c	0.23	+1.0
2,937,052	-		Rv2609c	0.23	+0.5