Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1452c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,635,023	+				-0.2
1,635,070	+				+0.7
1,636,001	+				+0.2
1,636,001	+				+0.1
1,636,001	+				+0.1
1,636,002	-				-0.6
1,636,002	-				-0.1
1,636,002	-				+0.0
1,636,002	-				+1.0
1,636,118	+				+0.1
1,636,118	+				-1.8
1,636,118	+				+0.1
1,636,118	+				-1.3
1,636,130	+				-0.1
1,636,131	-				+0.1
1,636,131	-				-0.2
1,636,131	-				-0.2
1,636,489	+		Rv1452c	0.22	+1.2
1,636,490	-		Rv1452c	0.22	-0.3
1,636,490	-		Rv1452c	0.22	-0.3
1,636,546	+		Rv1452c	0.24	+1.0
1,636,547	-		Rv1452c	0.24	+0.6
1,637,126	-		Rv1452c	0.50	+0.6
1,637,126	-		Rv1452c	0.50	+0.8
1,638,046	-				-0.6
1,638,212	+				+1.0
1,638,212	+				+0.0
1,638,369	+				+0.2
1,638,410	-				-1.0
1,638,668	-		Rv1453	0.23	-0.1
1,638,668	-		Rv1453	0.23	-0.6
1,638,668	-		Rv1453	0.23	-0.8
1,638,690	+		Rv1453	0.24	+2.0
1,638,690	+		Rv1453	0.24	-0.8
1,638,691	-		Rv1453	0.24	-0.0
1,638,776	-		Rv1453	0.31	-0.4
1,638,960	+		Rv1453	0.46	+0.8
1,639,120	+		Rv1453	0.58	-0.2
1,639,121	-		Rv1453	0.58	-0.2
1,639,121	-		Rv1453	0.58	+0.1
1,639,121	-		Rv1453	0.58	-0.2
1,639,174	+		Rv1453	0.63	+0.1
1,639,175	-		Rv1453	0.63	+0.9
1,639,175	-		Rv1453	0.63	+0.1