Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1239c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,380,953	+		Rv1238	0.23	-0.0
1,381,252	-		Rv1238	0.48	+0.2
1,381,300	+		Rv1238	0.52	+0.8
1,381,569	+		Rv1238	0.75	+0.8
1,381,644	+		Rv1238	0.81	+0.9
1,381,885	-				+0.3
1,381,885	-				-0.2
1,381,885	-				+0.1
1,381,885	-				+0.2
1,381,943	+				-1.1
1,381,990	-				+0.5
1,382,066	+		Rv1239c	0.11	+0.2
1,382,196	-		Rv1239c	0.23	-0.2
1,382,364	-		Rv1239c	0.38	+1.3
1,382,405	-		Rv1239c	0.42	+0.2
1,382,472	-		Rv1239c	0.48	+1.3
1,382,472	-		Rv1239c	0.48	-0.0
1,382,499	-		Rv1239c	0.51	+0.1
1,382,670	-		Rv1239c	0.66	+0.2
1,382,888	+		Rv1239c	0.86	+0.6
1,382,894	+		Rv1239c	0.86	-0.2
1,382,895	-		Rv1239c	0.87	+0.6
1,383,113	-				-0.4
1,383,125	+				+1.2
1,383,171	+				-0.1