Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1064c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,185,905	-		Rv1063c	0.15	+0.0
1,185,917	+		Rv1063c	0.16	-0.2
1,185,917	+		Rv1063c	0.16	-0.4
1,185,918	-		Rv1063c	0.16	+1.2
1,186,122	-		Rv1063c	0.35	-0.8
1,186,375	-		Rv1063c	0.59	+0.2
1,186,444	-		Rv1063c	0.65	-0.5
1,186,559	+		Rv1063c	0.76	-1.2
1,186,559	+		Rv1063c	0.76	-0.2
1,186,560	-		Rv1063c	0.76	-1.0
1,186,696	+		Rv1063c	0.88	+0.4
1,187,037	+		Rv1064c	0.32	+0.2
1,187,109	+		Rv1064c	0.49	+0.2
1,187,109	+		Rv1064c	0.49	+1.1
1,187,112	+		Rv1064c	0.50	-1.3
1,187,112	+		Rv1064c	0.50	+1.2
1,187,113	-		Rv1064c	0.50	+1.7
1,187,113	-		Rv1064c	0.50	+0.4
1,187,307	+				+0.2
1,187,334	+				+1.2
1,187,334	+				+0.5
1,187,334	+				-0.3
1,187,335	-				-0.2
1,187,440	+				+0.4
1,187,441	-				+0.3
1,187,603	+		Rv1065	0.30	+1.0
1,187,603	+		Rv1065	0.30	-0.4
1,187,603	+		Rv1065	0.30	-0.1
1,187,635	+		Rv1065	0.35	+0.3
1,187,636	-		Rv1065	0.35	+0.8
1,187,648	-		Rv1065	0.38	+0.3
1,187,648	-		Rv1065	0.38	+0.2
1,187,648	-		Rv1065	0.38	-0.3
1,187,897	+		Rv1065	0.81	+0.7
1,187,928	-		Rv1065	0.87	+1.0