Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0791c and Rv0792c overlap by 4 nucleotides Rv0792c and Rv0793 are separated by 72 nucleotides Rv0793 and Rv0794c are separated by 112 nucleotides
Rv0791c: Rv0791c - Conserved protein, at 884,797 to 885,840
Rv0791c
Rv0792c: Rv0792c - Probable transcriptional regulatory protein (probably GntR-family), at 885,837 to 886,646
Rv0792c
Rv0793: Rv0793 - Possible monooxygenase, at 886,719 to 887,024
Rv0793
Rv0794c: Rv0794c - Probable oxidoreductase, at 887,137 to 888,636
Rv0794c
Position (kb) 886
887
888 Strain fitness (log2 ratio) -1
0
1
2 at 885.970 kb on + strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.084 kb on - strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.232 kb on + strand, within Rv0792c at 886.320 kb on - strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.423 kb on - strand, within Rv0792c at 886.835 kb on + strand, within Rv0793 at 886.836 kb on - strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.840 kb on - strand, within Rv0793 at 886.935 kb on + strand, within Rv0793 at 886.936 kb on - strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 887.138 kb on + strand at 887.613 kb on - strand, within Rv0794c at 887.738 kb on - strand, within Rv0794c at 887.791 kb on + strand, within Rv0794c at 887.791 kb on + strand, within Rv0794c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with para-aminosalicylic 0.086 ug/mL remove 885,970 + Rv0792c 0.16 -0.5 886,030 - Rv0792c 0.24 +0.2 886,030 - Rv0792c 0.24 -0.0 886,083 + Rv0792c 0.30 -0.3 886,083 + Rv0792c 0.30 -0.0 886,083 + Rv0792c 0.30 -0.2 886,084 - Rv0792c 0.30 +0.1 886,111 + Rv0792c 0.34 +2.3 886,111 + Rv0792c 0.34 +1.4 886,111 + Rv0792c 0.34 +1.0 886,111 + Rv0792c 0.34 -1.2 886,112 - Rv0792c 0.34 -0.1 886,112 - Rv0792c 0.34 -0.2 886,112 - Rv0792c 0.34 -0.9 886,112 - Rv0792c 0.34 -0.3 886,232 + Rv0792c 0.49 -1.2 886,320 - Rv0792c 0.60 +1.0 886,400 + Rv0792c 0.70 -0.6 886,400 + Rv0792c 0.70 -0.6 886,400 + Rv0792c 0.70 -0.1 886,423 - Rv0792c 0.72 -0.2 886,835 + Rv0793 0.38 -0.2 886,836 - Rv0793 0.38 -0.5 886,839 + Rv0793 0.39 +0.6 886,839 + Rv0793 0.39 -1.4 886,839 + Rv0793 0.39 -0.3 886,839 + Rv0793 0.39 -1.2 886,840 - Rv0793 0.40 -0.4 886,935 + Rv0793 0.71 +0.0 886,936 - Rv0793 0.71 -0.5 886,944 + Rv0793 0.74 -0.2 886,944 + Rv0793 0.74 +0.4 886,944 + Rv0793 0.74 +0.0 887,138 + +0.0 887,613 - Rv0794c 0.32 -0.0 887,738 - Rv0794c 0.40 -1.2 887,791 + Rv0794c 0.44 -0.3 887,791 + Rv0794c 0.44 +0.2
Or see this region's nucleotide sequence