Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0815c and Rv0816c are separated by 292 nucleotides Rv0816c and Rv0817c overlap by 4 nucleotides Rv0817c and Rv0818 are separated by 129 nucleotides
Rv0815c: Rv0815c - Probable thiosulfate sulfurtransferase CysA2 (rhodanese-like protein) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase), at 908,485 to 909,318
Rv0815c
Rv0816c: Rv0816c - Probable thioredoxin ThiX, at 909,611 to 910,033
Rv0816c
Rv0817c: Rv0817c - Probable conserved exported protein, at 910,030 to 910,842
Rv0817c
Rv0818: Rv0818 - Transcriptional regulatory protein, at 910,972 to 911,739
Rv0818
Position (kb) 909
910
911 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 909.337 kb on + strand at 909.337 kb on + strand at 909.385 kb on + strand at 909.385 kb on + strand at 909.386 kb on - strand at 909.386 kb on - strand at 909.440 kb on + strand at 909.454 kb on + strand at 909.455 kb on - strand at 909.464 kb on + strand at 909.464 kb on + strand at 909.464 kb on + strand at 909.500 kb on + strand at 909.501 kb on - strand at 909.605 kb on + strand at 909.605 kb on + strand at 909.825 kb on - strand, within Rv0816c at 910.003 kb on + strand at 910.003 kb on + strand at 910.004 kb on - strand at 910.004 kb on - strand at 910.895 kb on + strand at 910.901 kb on + strand at 910.982 kb on + strand at 910.982 kb on + strand at 910.982 kb on + strand at 910.982 kb on + strand at 910.983 kb on - strand at 910.983 kb on - strand at 910.983 kb on - strand at 910.985 kb on + strand at 910.985 kb on + strand at 910.985 kb on + strand at 910.985 kb on + strand at 910.985 kb on + strand at 910.985 kb on + strand at 910.986 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 909,337 + -0.4 909,337 + +0.3 909,385 + -1.5 909,385 + -0.1 909,386 - -0.3 909,386 - +0.3 909,440 + -0.2 909,454 + -0.0 909,455 - -0.1 909,464 + +0.0 909,464 + -0.0 909,464 + -0.0 909,500 + +3.0 909,501 - +1.0 909,605 + -2.4 909,605 + -0.1 909,825 - Rv0816c 0.51 -0.0 910,003 + -0.2 910,003 + -0.2 910,004 - -0.3 910,004 - -0.6 910,895 + -0.2 910,901 + +2.0 910,982 + -0.8 910,982 + -1.0 910,982 + -0.1 910,982 + -0.6 910,983 - -1.4 910,983 - +1.4 910,983 - -1.2 910,985 + -0.2 910,985 + +3.0 910,985 + +0.0 910,985 + -0.0 910,985 + +2.0 910,985 + -0.7 910,986 - -0.0
Or see this region's nucleotide sequence