Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0479c and Rv0480c overlap by 4 nucleotides Rv0480c and Rv0481c are separated by 181 nucleotides Rv0481c and Rv0482 are separated by 26 nucleotides
Rv0479c: Rv0479c - Probable conserved membrane protein, at 567,921 to 568,967
Rv0479c
Rv0480c: Rv0480c - Possible amidohydrolase, at 568,964 to 569,806
Rv0480c
Rv0481c: Rv0481c - Hypothetical protein, at 569,988 to 570,512
Rv0481c
Rv0482: Rv0482 - Probable UDP-N-acetylenolpyruvoylglucosamine reductase MurB (UDP-N-acetylmuramate dehydrogenase), at 570,539 to 571,648
Rv0482
Position (kb) 568
569
570 Strain fitness (log2 ratio) -1
0
1 at 568.833 kb on - strand, within Rv0479c at 569.015 kb on + strand at 569.016 kb on - strand at 569.220 kb on + strand, within Rv0480c at 569.220 kb on + strand, within Rv0480c at 569.220 kb on + strand, within Rv0480c at 569.220 kb on + strand, within Rv0480c at 569.221 kb on - strand, within Rv0480c at 569.221 kb on - strand, within Rv0480c at 569.343 kb on + strand, within Rv0480c at 569.367 kb on + strand, within Rv0480c at 569.368 kb on - strand, within Rv0480c at 569.409 kb on - strand, within Rv0480c at 569.437 kb on + strand, within Rv0480c at 569.466 kb on + strand, within Rv0480c at 569.467 kb on - strand, within Rv0480c at 569.737 kb on - strand at 569.774 kb on - strand at 570.039 kb on + strand at 570.048 kb on + strand, within Rv0481c at 570.048 kb on + strand, within Rv0481c at 570.049 kb on - strand, within Rv0481c at 570.049 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.372 kb on + strand, within Rv0481c at 570.372 kb on + strand, within Rv0481c at 570.373 kb on - strand, within Rv0481c at 570.378 kb on + strand, within Rv0481c at 570.433 kb on + strand, within Rv0481c at 570.433 kb on + strand, within Rv0481c at 570.445 kb on + strand, within Rv0481c at 570.445 kb on + strand, within Rv0481c at 570.446 kb on - strand, within Rv0481c at 570.481 kb on + strand at 570.482 kb on - strand at 570.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 568,833 - Rv0479c 0.87 -0.2 569,015 + -0.4 569,016 - -0.2 569,220 + Rv0480c 0.30 +0.5 569,220 + Rv0480c 0.30 +0.5 569,220 + Rv0480c 0.30 +0.4 569,220 + Rv0480c 0.30 +1.0 569,221 - Rv0480c 0.30 -0.1 569,221 - Rv0480c 0.30 -0.3 569,343 + Rv0480c 0.45 +0.2 569,367 + Rv0480c 0.48 +1.0 569,368 - Rv0480c 0.48 +1.7 569,409 - Rv0480c 0.53 +1.1 569,437 + Rv0480c 0.56 +1.0 569,466 + Rv0480c 0.60 -0.5 569,467 - Rv0480c 0.60 -0.3 569,737 - -0.0 569,774 - -0.0 570,039 + -0.2 570,048 + Rv0481c 0.11 -1.2 570,048 + Rv0481c 0.11 -0.2 570,049 - Rv0481c 0.12 -0.5 570,049 - Rv0481c 0.12 +0.1 570,096 - Rv0481c 0.21 -1.5 570,096 - Rv0481c 0.21 -0.2 570,096 - Rv0481c 0.21 +1.0 570,372 + Rv0481c 0.73 +0.8 570,372 + Rv0481c 0.73 +0.0 570,373 - Rv0481c 0.73 +1.5 570,378 + Rv0481c 0.74 -0.0 570,433 + Rv0481c 0.85 -0.2 570,433 + Rv0481c 0.85 +0.0 570,445 + Rv0481c 0.87 +0.4 570,445 + Rv0481c 0.87 -0.5 570,446 - Rv0481c 0.87 +0.4 570,481 + +0.4 570,482 - -1.0 570,512 + -0.8
Or see this region's nucleotide sequence