Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3817

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
4,280,649	+		Rv3815c	0.81	-0.3
4,280,649	+		Rv3815c	0.81	-0.2
4,280,650	-		Rv3815c	0.82	+0.8
4,280,650	-		Rv3815c	0.82	-0.4
4,280,650	-		Rv3815c	0.82	-0.1
4,280,650	-		Rv3815c	0.82	-0.8
4,280,650	-		Rv3815c	0.82	+0.0
4,280,650	-		Rv3815c	0.82	-0.0
4,280,666	-		Rv3815c	0.84	-0.3
4,280,712	+		Rv3815c	0.90	+3.7
4,280,713	-				-0.3
4,280,845	+				-0.0
4,280,846	-				-0.7
4,280,846	-				+0.1
4,280,950	-		Rv3816c	0.20	+1.0
4,281,559	-				+0.5
4,281,585	-				-1.0
4,281,861	-		Rv3817	0.28	+0.8
4,282,428	-				+1.1
4,282,444	+				+0.6
4,282,537	-				+2.8
4,282,606	-		Rv3818	0.10	-0.2
4,282,624	+		Rv3818	0.11	-0.3
4,282,964	+		Rv3818	0.33	+0.3
4,282,964	+		Rv3818	0.33	+0.2
4,282,965	-		Rv3818	0.33	-1.2
4,282,965	-		Rv3818	0.33	+0.3
4,283,005	-		Rv3818	0.36	+0.3
4,283,080	-		Rv3818	0.41	+0.1
4,283,137	+		Rv3818	0.44	-1.8
4,283,138	-		Rv3818	0.44	-1.1
4,283,186	+		Rv3818	0.48	-0.1