Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3234c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
3,609,392	+		Rv3232c	0.59	+0.2
3,609,392	+		Rv3232c	0.59	+2.1
3,609,393	-		Rv3232c	0.59	-0.0
3,609,393	-		Rv3232c	0.59	+1.1
3,609,421	+		Rv3232c	0.62	-0.8
3,609,421	+		Rv3232c	0.62	-0.8
3,609,422	-		Rv3232c	0.62	-1.1
3,609,423	+		Rv3232c	0.62	-0.1
3,609,423	+		Rv3232c	0.62	+0.0
3,609,423	+		Rv3232c	0.62	-0.8
3,609,423	+		Rv3232c	0.62	-0.2
3,609,424	-		Rv3232c	0.62	-0.8
3,609,432	+		Rv3232c	0.63	-1.0
3,609,432	+		Rv3232c	0.63	-1.5
3,609,432	+		Rv3232c	0.63	-0.0
3,609,433	-		Rv3232c	0.63	+1.0
3,609,433	-		Rv3232c	0.63	-0.1
3,609,435	+		Rv3232c	0.64	+0.2
3,609,504	+		Rv3232c	0.71	-0.4
3,609,536	-		Rv3232c	0.75	-0.7
3,609,645	+		Rv3232c	0.87	+0.7
3,609,749	+				-0.3
3,609,749	+				-0.1
3,609,750	-				+0.9
3,609,752	-				-1.4
3,609,783	-				-0.3
3,609,881	+		Rv3233c	0.17	-0.0
3,609,881	+		Rv3233c	0.17	-0.7
3,609,882	-		Rv3233c	0.17	-1.6
3,609,882	-		Rv3233c	0.17	-0.4
3,609,894	+		Rv3233c	0.19	-0.5
3,609,897	-		Rv3233c	0.20	-0.2
3,609,897	-		Rv3233c	0.20	+1.5
3,609,950	+		Rv3233c	0.29	-0.2
3,609,951	-		Rv3233c	0.29	-0.5
3,609,951	-		Rv3233c	0.29	-0.8
3,609,969	+		Rv3233c	0.32	-0.0
3,609,980	+		Rv3233c	0.34	+0.0
3,609,981	-		Rv3233c	0.34	+0.0
3,609,981	-		Rv3233c	0.34	-0.6
3,609,981	-		Rv3233c	0.34	+0.0
3,610,044	+		Rv3233c	0.45	-0.6
3,610,087	+		Rv3233c	0.52	+0.1
3,610,107	+		Rv3233c	0.55	+0.7
3,610,107	+		Rv3233c	0.55	+0.9
3,610,107	+		Rv3233c	0.55	-0.6
3,610,108	-		Rv3233c	0.55	-0.5
3,610,108	-		Rv3233c	0.55	-0.5
3,610,278	-		Rv3233c	0.84	-0.3
3,610,424	-				+1.3
3,610,451	+				-2.3
3,610,605	+		Rv3234c	0.28	-0.3
3,610,605	+		Rv3234c	0.28	+0.1
3,610,605	+		Rv3234c	0.28	+0.6
3,610,606	-		Rv3234c	0.28	+0.4
3,610,606	-		Rv3234c	0.28	-0.4
3,610,792	+		Rv3234c	0.51	-0.5
3,610,793	-		Rv3234c	0.51	-0.3
3,610,831	+		Rv3234c	0.56	-0.2
3,610,831	+		Rv3234c	0.56	-2.0
3,610,831	+		Rv3234c	0.56	-0.9
3,610,832	-		Rv3234c	0.56	-0.0
3,610,832	-		Rv3234c	0.56	-0.7
3,610,832	-		Rv3234c	0.56	-2.5
3,610,946	-		Rv3234c	0.70	+0.3
3,610,946	-		Rv3234c	0.70	-0.5
3,610,946	-		Rv3234c	0.70	-0.3
3,610,946	-		Rv3234c	0.70	+0.1
3,611,122	+				+0.9
3,611,123	-				-0.4
3,611,123	-				+0.1
3,611,123	-				+2.5
3,611,123	-				+0.8
3,611,123	-				-1.5
3,611,123	-				-0.5
3,611,123	-				-1.6
3,611,152	+				-1.1
3,611,404	+		Rv3235	0.16	+1.0
3,611,529	+		Rv3235	0.36	+0.2
3,611,840	+		Rv3235	0.84	-1.4
3,611,840	+		Rv3235	0.84	+0.4
3,611,840	+		Rv3235	0.84	+0.5
3,611,841	-		Rv3235	0.84	+0.0
3,611,841	-		Rv3235	0.84	+0.1
3,611,841	-		Rv3235	0.84	+0.3
3,611,961	-				-2.6
3,611,971	+				+0.3
3,611,972	-				+0.5
3,612,044	+				+0.7
3,612,044	+				+1.0
3,612,045	-				-0.3