Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2885c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
3,193,254	-				-0.9
3,193,254	-				-0.9
3,193,339	+				-0.1
3,193,461	-				-0.4
3,193,467	+				-1.5
3,193,468	-				-0.5
3,193,645	-		Rv2884	0.33	-0.4
3,193,849	+		Rv2884	0.60	-1.3
3,193,999	-		Rv2884	0.80	-0.6
3,194,015	+		Rv2884	0.82	+0.7
3,194,015	+		Rv2884	0.82	-0.2
3,194,083	+				+1.3
3,194,084	-				-3.0
3,194,084	-				+0.3
3,194,086	-				-0.3
3,194,501	-		Rv2885c	0.24	+0.5
3,194,501	-		Rv2885c	0.24	-0.5
3,194,622	-		Rv2885c	0.33	-0.0
3,195,047	+		Rv2885c	0.64	+0.1
3,195,048	-		Rv2885c	0.64	+0.2
3,195,152	+		Rv2885c	0.71	+0.0
3,195,217	+		Rv2885c	0.76	-0.1
3,195,218	-		Rv2885c	0.76	+0.9
3,195,218	-		Rv2885c	0.76	+0.1
3,195,550	+				-1.3
3,195,639	-		Rv2886c	0.11	-0.1
3,195,639	-		Rv2886c	0.11	-0.2
3,195,741	-		Rv2886c	0.22	+2.4
3,195,741	-		Rv2886c	0.22	-0.9
3,195,918	-		Rv2886c	0.42	-1.0
3,196,080	+		Rv2886c	0.60	-1.1
3,196,081	-		Rv2886c	0.60	+0.9
3,196,133	-		Rv2886c	0.66	-1.3
3,196,144	+		Rv2886c	0.67	+0.4
3,196,311	+		Rv2886c	0.86	-0.2
3,196,312	-		Rv2886c	0.86	-0.1
3,196,438	+				-0.9
3,196,487	-		Rv2887	0.13	+2.3