Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2529

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
2,852,017	-		Rv2528c	0.29	+0.2
2,852,035	-		Rv2528c	0.31	+0.2
2,852,506	-		Rv2528c	0.82	-1.6
2,852,506	-		Rv2528c	0.82	-1.2
2,852,625	+				+0.4
2,852,724	+				-0.6
2,852,814	+				-0.1
2,852,814	+				+0.8
2,852,828	-				-0.0
2,852,828	-				-0.5
2,852,828	-				-0.6
2,853,439	+		Rv2529	0.41	-0.9
2,853,439	+		Rv2529	0.41	+0.4
2,853,504	-		Rv2529	0.45	-2.7
2,853,935	-		Rv2529	0.76	+0.4
2,854,908	-				-1.5
2,855,040	+				-0.1
2,855,122	+				-0.6
2,855,122	+				+0.2
2,855,122	+				+0.9
2,855,122	+				-0.4
2,855,162	-				-2.5
2,855,162	-				+0.2
2,855,241	+		Rv2531c	0.11	+3.2