Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2077c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
2,332,392	+		Rv2075c	0.67	-2.7
2,332,392	+		Rv2075c	0.67	-0.4
2,332,392	+		Rv2075c	0.67	+0.2
2,332,393	-		Rv2075c	0.67	-0.3
2,332,393	-		Rv2075c	0.67	+0.6
2,332,598	+		Rv2075c	0.81	-0.3
2,332,598	+		Rv2075c	0.81	-0.5
2,332,598	+		Rv2075c	0.81	-0.5
2,332,598	+		Rv2075c	0.81	-0.5
2,332,599	-		Rv2075c	0.81	-0.4
2,332,599	-		Rv2075c	0.81	-0.5
2,332,602	+		Rv2075c	0.81	-0.5
2,332,602	+		Rv2075c	0.81	+1.8
2,332,602	+		Rv2075c	0.81	-0.7
2,332,742	+				-0.2
2,332,745	+				-0.6
2,332,789	-				-2.8
2,332,901	-				-1.7
2,332,901	-				-1.0
2,332,959	-				-0.1
2,332,993	+				+0.3
2,333,018	+				+0.5
2,333,019	-				+1.5
2,333,030	+				+0.4
2,333,031	-				+0.6
2,333,201	+		Rv2076c	0.65	-2.1
2,333,202	-		Rv2076c	0.65	+1.1
2,333,202	-		Rv2076c	0.65	-0.1
2,333,212	+		Rv2076c	0.69	-0.4
2,333,212	+		Rv2076c	0.69	+0.2
2,333,212	+		Rv2076c	0.69	-0.2
2,333,213	-		Rv2076c	0.70	-0.2
2,333,324	+				+0.2
2,333,374	+				+0.7
2,333,389	+				-0.3
2,333,389	+				-1.8
2,333,390	-				-0.9
2,333,493	+		Rv2077c	0.17	+1.8
2,333,493	+		Rv2077c	0.17	-0.5
2,333,493	+		Rv2077c	0.17	-1.0
2,333,493	+		Rv2077c	0.17	-0.7
2,333,493	+		Rv2077c	0.17	-0.5
2,333,493	+		Rv2077c	0.17	-0.7
2,333,494	-		Rv2077c	0.18	+0.8
2,333,494	-		Rv2077c	0.18	-1.2
2,333,562	+		Rv2077c	0.25	-0.9
2,333,749	+		Rv2077c	0.44	-0.9
2,333,749	+		Rv2077c	0.44	-1.9
2,333,750	-		Rv2077c	0.44	-1.8
2,333,872	+		Rv2077c	0.56	+0.2
2,333,908	+		Rv2077c	0.60	-1.3
2,333,909	-		Rv2077c	0.60	+0.1
2,333,963	-		Rv2077c	0.66	-0.2
2,334,005	-		Rv2077c	0.70	-0.5
2,334,005	-		Rv2077c	0.70	-0.3
2,334,011	+		Rv2077c	0.71	-0.2
2,334,012	-		Rv2077c	0.71	-0.7
2,334,012	-		Rv2077c	0.71	-0.2
2,334,012	-		Rv2077c	0.71	-0.4
2,334,012	-		Rv2077c	0.71	-1.3
2,334,012	-		Rv2077c	0.71	+0.4
2,334,015	+		Rv2077c	0.71	-0.9
2,334,015	+		Rv2077c	0.71	+0.9
2,334,015	+		Rv2077c	0.71	+0.7
2,334,015	+		Rv2077c	0.71	-0.7
2,334,015	+		Rv2077c	0.71	-0.7
2,334,016	-		Rv2077c	0.71	+0.7
2,334,016	-		Rv2077c	0.71	+0.3
2,334,016	-		Rv2077c	0.71	+0.1
2,334,016	-		Rv2077c	0.71	+1.1
2,334,039	+		Rv2077c	0.74	-0.7
2,334,247	-				-0.4
2,334,297	-				-0.9
2,334,297	-				-0.5
2,334,297	-				-1.2
2,334,297	-				-0.3
2,334,359	+		Rv2077A	0.21	-0.0
2,334,359	+		Rv2077A	0.21	-0.3
2,334,360	-		Rv2077A	0.22	+0.2
2,334,448	-		Rv2077A	0.51	+1.0
2,334,630	-				-0.3
2,334,727	+				-1.5
2,334,981	-				-2.6
2,334,981	-				-0.2
2,335,029	-				+1.1
2,335,035	-				-1.3