Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1672c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
1,895,876	+		Rv1669	0.42	-0.4
1,895,877	-		Rv1669	0.42	+0.1
1,895,891	+		Rv1669	0.46	-0.8
1,895,960	+		Rv1669	0.65	+0.3
1,895,961	-		Rv1669	0.65	-1.7
1,896,005	-		Rv1669	0.77	+0.3
1,896,280	-		Rv1670	0.46	-0.5
1,896,280	-		Rv1670	0.46	-1.3
1,896,303	+		Rv1670	0.53	+0.3
1,896,334	-		Rv1670	0.61	+0.5
1,896,334	-		Rv1670	0.61	-1.4
1,896,336	+		Rv1670	0.62	+0.2
1,896,628	-		Rv1671	0.39	-0.4
1,896,673	+		Rv1671	0.50	-0.2
1,896,674	-		Rv1671	0.51	-0.4
1,896,821	-		Rv1671	0.88	-1.1
1,896,866	-				-0.3
1,896,874	+				+1.2
1,896,933	+				-0.4
1,896,934	-				-0.0
1,896,988	-				+1.2
1,897,281	-		Rv1672c	0.30	-0.9
1,897,354	+		Rv1672c	0.36	-1.3
1,897,416	+		Rv1672c	0.41	-0.6
1,897,444	+		Rv1672c	0.43	+3.1
1,897,456	+		Rv1672c	0.44	-1.2
1,897,468	+		Rv1672c	0.44	+1.1
1,897,876	+		Rv1672c	0.75	-1.1
1,898,009	-		Rv1672c	0.85	-0.7
1,898,126	-				-1.8
1,898,595	-		Rv1673c	0.32	+1.0
1,898,745	+		Rv1673c	0.48	-0.2
1,898,745	+		Rv1673c	0.48	+0.2
1,898,767	-		Rv1673c	0.50	-0.2
1,898,833	+		Rv1673c	0.57	-0.2
1,899,048	+		Rv1673c	0.80	-2.4
1,899,049	-		Rv1673c	0.80	-0.0