Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1426c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
1,600,481	-		Rv1425	0.60	-0.6
1,600,481	-		Rv1425	0.60	+2.9
1,600,612	-		Rv1425	0.69	-0.6
1,600,757	-		Rv1425	0.80	+0.1
1,600,837	+		Rv1425	0.85	-1.2
1,600,837	+		Rv1425	0.85	+0.4
1,600,837	+		Rv1425	0.85	-0.5
1,600,837	+		Rv1425	0.85	+1.0
1,600,838	-		Rv1425	0.86	+1.0
1,600,838	-		Rv1425	0.86	+1.1
1,600,838	-		Rv1425	0.86	+0.4
1,600,838	-		Rv1425	0.86	-0.5
1,600,839	+		Rv1425	0.86	+0.1
1,600,839	+		Rv1425	0.86	-0.3
1,600,839	+		Rv1425	0.86	+0.3
1,600,840	-		Rv1425	0.86	-0.3
1,600,930	+				+1.0
1,601,035	+				-0.7
1,601,041	+				-0.4
1,601,041	+				-0.4
1,601,041	+				-0.1
1,601,051	-				-0.7
1,601,052	+				-1.0
1,601,053	-				-2.5
1,601,060	+				+1.3
1,601,084	+				-0.3
1,601,672	+		Rv1426c	0.49	-1.3
1,601,673	-		Rv1426c	0.49	-0.7
1,601,673	-		Rv1426c	0.49	+0.5
1,601,858	+		Rv1426c	0.63	+0.3
1,601,858	+		Rv1426c	0.63	+0.5
1,601,934	+		Rv1426c	0.69	-0.2
1,601,970	+		Rv1426c	0.72	+0.7
1,601,975	+		Rv1426c	0.73	-0.7
1,602,164	+		Rv1426c	0.87	+0.1
1,602,165	-		Rv1426c	0.88	-0.0
1,602,418	+				-0.0
1,602,418	+				+0.2
1,602,418	+				-0.2
1,602,514	+		Rv1427c	0.12	+0.8
1,602,595	+		Rv1427c	0.17	+1.1
1,602,595	+		Rv1427c	0.17	-0.9
1,602,728	+		Rv1427c	0.25	-0.5
1,602,729	-		Rv1427c	0.25	+0.3
1,602,729	-		Rv1427c	0.25	-0.9
1,602,731	-		Rv1427c	0.25	-0.6
1,602,760	+		Rv1427c	0.27	-0.5