Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1363c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
1,533,658	+				-0.5
1,533,662	+				+0.5
1,533,663	-				-0.2
1,533,717	-				+4.1
1,533,798	+				+0.5
1,533,798	+				-2.4
1,533,939	+				-1.9
1,533,949	+				-0.6
1,533,950	-				-0.3
1,533,950	-				-4.5
1,533,996	+				+0.3
1,534,046	+		Rv1362c	0.15	-2.3
1,534,047	-		Rv1362c	0.15	-0.4
1,534,099	-		Rv1362c	0.23	-0.3
1,534,193	-		Rv1362c	0.37	-0.4
1,534,360	+		Rv1362c	0.62	-0.0
1,534,361	-		Rv1362c	0.62	-0.2
1,534,363	-		Rv1362c	0.63	-0.9
1,534,597	-				+0.1
1,534,638	+				-0.2
1,534,638	+				+3.0
1,534,638	+				-0.5
1,535,155	-		Rv1363c	0.70	-0.9
1,535,155	-		Rv1363c	0.70	-0.3
1,535,173	-		Rv1363c	0.72	-0.6
1,535,199	+		Rv1363c	0.75	-0.9
1,535,400	-				-0.8
1,535,413	-				-0.3
1,535,447	+				-0.7
1,535,461	-				-1.4
1,535,572	+				+2.1
1,535,572	+				-0.1
1,536,081	+		Rv1364c	0.20	-1.2
1,536,082	-		Rv1364c	0.20	+0.3
1,536,133	+		Rv1364c	0.23	+1.6