Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1069c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
1,191,889	+		Rv1068c	0.81	-0.1
1,191,964	+		Rv1068c	0.87	+1.3
1,192,141	+				+0.5
1,192,142	-				+0.4
1,192,142	-				+0.0
1,192,274	-				-0.1
1,192,411	+				-0.7
1,192,628	+				+0.0
1,192,672	-				+1.2
1,192,820	+		Rv1069c	0.18	-0.6
1,192,821	-		Rv1069c	0.18	+0.7
1,192,907	+		Rv1069c	0.23	+0.2
1,193,210	+		Rv1069c	0.40	+0.4
1,193,211	-		Rv1069c	0.40	+1.7
1,193,243	+		Rv1069c	0.42	+0.4
1,193,243	+		Rv1069c	0.42	+0.4
1,193,243	+		Rv1069c	0.42	+0.8
1,193,243	+		Rv1069c	0.42	+0.2
1,193,243	+		Rv1069c	0.42	-0.9
1,193,244	-		Rv1069c	0.42	-0.7
1,193,244	-		Rv1069c	0.42	+0.4
1,193,244	-		Rv1069c	0.42	+0.1
1,193,244	-		Rv1069c	0.42	+0.9
1,193,244	-		Rv1069c	0.42	+0.3
1,193,244	-		Rv1069c	0.42	+0.9
1,193,345	-		Rv1069c	0.47	+1.3
1,193,345	-		Rv1069c	0.47	+1.3
1,193,345	-		Rv1069c	0.47	-0.5
1,193,405	+		Rv1069c	0.51	+1.1
1,193,406	-		Rv1069c	0.51	+0.9
1,193,822	+		Rv1069c	0.74	+0.3
1,193,823	-		Rv1069c	0.74	-2.1
1,193,848	+		Rv1069c	0.76	+0.8
1,193,849	-		Rv1069c	0.76	+0.1
1,193,979	-		Rv1069c	0.83	+0.2
1,193,979	-		Rv1069c	0.83	-0.2
1,193,979	-		Rv1069c	0.83	+0.3
1,193,979	-		Rv1069c	0.83	-1.9
1,194,014	+		Rv1069c	0.85	+0.8
1,194,317	+				+0.1
1,194,317	+				+0.7
1,194,370	+		Rv1070c	0.13	-0.6
1,194,370	+		Rv1070c	0.13	+0.9
1,194,370	+		Rv1070c	0.13	-0.1
1,194,371	-		Rv1070c	0.13	-0.7
1,194,584	+		Rv1070c	0.41	+0.6
1,194,648	+		Rv1070c	0.49	-0.2
1,194,734	-		Rv1070c	0.60	+0.8
1,194,995	+				+0.3
1,195,049	-				+0.3
1,195,057	-				+0.7
1,195,225	-		Rv1071c	0.16	-0.4
1,195,225	-		Rv1071c	0.16	-0.5
1,195,225	-		Rv1071c	0.16	+2.5
1,195,248	-		Rv1071c	0.19	-0.1