Experiment: 7H9 with Ofloxacin 0.8 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0766c and Rv0767c overlap by 4 nucleotides Rv0767c and Rv0768 are separated by 201 nucleotides Rv0768 and Rv0769 are separated by 30 nucleotides Rv0769 and Rv0770 are separated by 97 nucleotides
Rv0766c: Rv0766c - Probable cytochrome P450 123 Cyp123, at 858,864 to 860,072
Rv0766c
Rv0767c: Rv0767c - Conserved hypothetical protein, at 860,069 to 860,710
Rv0767c
Rv0768: Rv0768 - Probable aldehyde dehydrogenase NAD dependent AldA (aldehyde dehydrogenase [NAD+]), at 860,912 to 862,381
Rv0768
Rv0769: Rv0769 - Probable dehydrogenase/reductase, at 862,412 to 863,158
Rv0769
Rv0770: Rv0770 - Probable dehydrogenase/reductase, at 863,256 to 864,143
Rv0770
Position (kb) 860
861
862
863 Strain fitness (log2 ratio) -2
-1
0
1
2 at 860.030 kb on - strand at 860.099 kb on - strand at 860.127 kb on + strand at 860.154 kb on + strand, within Rv0767c at 860.180 kb on + strand, within Rv0767c at 860.466 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.503 kb on - strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.603 kb on + strand, within Rv0767c at 860.604 kb on - strand, within Rv0767c at 860.909 kb on + strand at 861.174 kb on + strand, within Rv0768 at 861.255 kb on + strand, within Rv0768 at 861.255 kb on + strand, within Rv0768 at 861.256 kb on - strand, within Rv0768 at 861.951 kb on - strand, within Rv0768 at 861.951 kb on - strand, within Rv0768 at 862.661 kb on + strand, within Rv0769 at 862.662 kb on - strand, within Rv0769 at 862.777 kb on + strand, within Rv0769 at 862.791 kb on - strand, within Rv0769 at 862.938 kb on + strand, within Rv0769 at 862.938 kb on + strand, within Rv0769 at 863.289 kb on + strand at 863.291 kb on + strand at 863.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ofloxacin 0.8 ug/mL remove 860,030 - -0.4 860,099 - -0.2 860,127 + +1.8 860,154 + Rv0767c 0.13 -1.6 860,180 + Rv0767c 0.17 -0.3 860,466 + Rv0767c 0.62 -0.2 860,502 + Rv0767c 0.67 -1.0 860,502 + Rv0767c 0.67 +0.5 860,502 + Rv0767c 0.67 -0.5 860,503 - Rv0767c 0.68 -0.0 860,508 + Rv0767c 0.68 -0.2 860,508 + Rv0767c 0.68 -0.5 860,508 + Rv0767c 0.68 -0.4 860,603 + Rv0767c 0.83 +0.5 860,604 - Rv0767c 0.83 +0.1 860,909 + +0.2 861,174 + Rv0768 0.18 -0.3 861,255 + Rv0768 0.23 -0.4 861,255 + Rv0768 0.23 -0.7 861,256 - Rv0768 0.23 -1.9 861,951 - Rv0768 0.71 +0.8 861,951 - Rv0768 0.71 -0.5 862,661 + Rv0769 0.33 -0.8 862,662 - Rv0769 0.33 -1.4 862,777 + Rv0769 0.49 -0.9 862,791 - Rv0769 0.51 -0.8 862,938 + Rv0769 0.70 +0.2 862,938 + Rv0769 0.70 +0.1 863,289 + -0.1 863,291 + -0.1 863,291 + -0.5
Or see this region's nucleotide sequence