Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3663c
Experiment: 7H9 with Ofloxacin 0.8 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Ofloxacin 0.8 ug/mL |
---|---|---|---|---|---|
remove | |||||
4,101,041 | + | -0.4 | |||
4,101,041 | + | -0.5 | |||
4,101,042 | - | -0.0 | |||
4,101,042 | - | -0.4 | |||
4,101,042 | - | -0.2 | |||
4,101,263 | - | -0.7 | |||
4,102,288 | - | Rv3663c | 0.16 | -1.2 | |
4,102,523 | - | Rv3663c | 0.30 | +1.9 | |
4,103,055 | + | Rv3663c | 0.62 | -0.2 | |
4,103,395 | + | Rv3663c | 0.83 | -2.0 | |
4,104,213 | + | Rv3664c | 0.67 | -0.3 | |
4,104,303 | + | Rv3664c | 0.78 | +0.6 | |
4,104,397 | - | -0.5 | |||
4,104,482 | - | -0.1 | |||
4,104,482 | - | +0.7 |
Or see this region's nucleotide sequence