Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3418c
Experiment: 7H9 with Ofloxacin 0.8 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Ofloxacin 0.8 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,836,043 | - | Rv3417c | 0.48 | +0.1 | |
3,836,059 | + | Rv3417c | 0.49 | -0.2 | |
3,836,290 | + | Rv3417c | 0.63 | -0.7 | |
3,836,291 | - | Rv3417c | 0.63 | -0.7 | |
3,836,873 | - | -0.3 | |||
3,837,955 | + | Rv3419c | 0.39 | -0.8 | |
3,838,167 | - | Rv3419c | 0.59 | +0.4 | |
3,838,167 | - | Rv3419c | 0.59 | +1.4 | |
3,838,220 | - | Rv3419c | 0.64 | +1.2 |
Or see this region's nucleotide sequence