Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2299c

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
2,569,088	+				-0.5
2,569,089	-				-0.3
2,569,256	+		Rv2298	0.18	+0.4
2,569,256	+		Rv2298	0.18	+1.6
2,569,279	+		Rv2298	0.20	+3.0
2,569,280	-		Rv2298	0.20	-0.7
2,569,526	+		Rv2298	0.46	+0.5
2,569,590	+		Rv2298	0.52	+0.0
2,569,670	+		Rv2298	0.60	+0.7
2,569,692	+		Rv2298	0.63	-0.3
2,569,693	-		Rv2298	0.63	-0.6
2,570,060	+				+2.3
2,570,060	+				-0.4
2,570,060	+				+0.5
2,570,068	-				-0.1
2,570,298	-		Rv2299c	0.12	-0.6
2,570,607	+		Rv2299c	0.28	-0.6
2,570,607	+		Rv2299c	0.28	+0.2
2,570,664	-		Rv2299c	0.31	-0.0
2,570,702	+		Rv2299c	0.33	+0.1
2,570,735	+		Rv2299c	0.35	-1.5
2,570,736	-		Rv2299c	0.35	-0.8
2,571,002	+		Rv2299c	0.49	-1.0
2,571,203	+		Rv2299c	0.59	-0.7
2,571,203	+		Rv2299c	0.59	-0.8
2,571,215	+		Rv2299c	0.59	+0.2
2,571,215	+		Rv2299c	0.59	-0.8
2,571,215	+		Rv2299c	0.59	+0.5
2,571,216	-		Rv2299c	0.60	+0.0
2,571,402	+		Rv2299c	0.69	-1.8
2,571,425	+		Rv2299c	0.70	-0.3
2,571,425	+		Rv2299c	0.70	+2.0
2,571,516	-		Rv2299c	0.75	-0.4
2,571,516	-		Rv2299c	0.75	+0.6
2,571,611	+		Rv2299c	0.80	-0.2
2,571,772	-		Rv2299c	0.88	+2.2
2,571,872	-				-1.0
2,571,918	+				+0.9
2,571,918	+				-0.4
2,571,919	-				-0.6
2,571,919	-				+2.0
2,572,022	+				-1.1
2,572,022	+				+0.4
2,572,023	-				-0.9
2,572,023	-				-0.4
2,572,101	+				+0.7
2,572,101	+				+0.0
2,572,133	+				+1.1
2,572,133	+				+0.2
2,572,134	-				-0.2
2,572,134	-				-0.9
2,572,134	-				-0.3
2,572,134	-				-1.1
2,572,202	-		Rv2300c	0.14	+0.1
2,572,203	+		Rv2300c	0.14	+0.3
2,572,204	-		Rv2300c	0.14	+2.1
2,572,204	-		Rv2300c	0.14	-0.2
2,572,204	-		Rv2300c	0.14	-2.1
2,572,275	+		Rv2300c	0.21	+0.1
2,572,275	+		Rv2300c	0.21	-0.3
2,572,275	+		Rv2300c	0.21	-0.4
2,572,276	-		Rv2300c	0.21	-0.3
2,572,325	+		Rv2300c	0.27	-0.3
2,572,706	+		Rv2300c	0.68	+0.2
2,572,712	+		Rv2300c	0.68	-0.7
2,572,802	+		Rv2300c	0.78	-0.2
2,572,802	+		Rv2300c	0.78	-0.5
2,572,803	-		Rv2300c	0.78	-0.4
2,572,889	+		Rv2300c	0.87	-1.6
2,572,889	+		Rv2300c	0.87	-0.6
2,572,890	-		Rv2300c	0.87	-0.1
2,572,890	-		Rv2300c	0.87	-0.3
2,572,890	-		Rv2300c	0.87	+0.6
2,572,890	-		Rv2300c	0.87	+0.9
2,572,890	-		Rv2300c	0.87	+0.8
2,572,894	+		Rv2300c	0.88	-0.9
2,572,894	+		Rv2300c	0.88	-0.2
2,572,894	+		Rv2300c	0.88	+0.7
2,572,894	+		Rv2300c	0.88	+1.0
2,572,894	+		Rv2300c	0.88	+0.9
2,572,895	-		Rv2300c	0.88	+0.8
2,572,895	-		Rv2300c	0.88	-0.4
2,572,895	-		Rv2300c	0.88	-0.0
2,572,895	-		Rv2300c	0.88	-0.8
2,572,895	-		Rv2300c	0.88	-0.7