Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1786

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
2,024,268	+		Rv1785c	0.69	-0.6
2,024,269	-		Rv1785c	0.70	-0.2
2,024,269	-		Rv1785c	0.70	-1.8
2,024,327	+		Rv1785c	0.74	+0.8
2,024,487	-		Rv1785c	0.88	-1.3
2,024,563	+				-0.3
2,024,591	+				-0.3
2,024,591	+				-1.5
2,024,592	-				+0.2
2,024,592	-				-0.3
2,024,675	+				+0.4
2,024,675	+				-0.1
2,024,701	+				-0.2
2,024,702	-				-0.1
2,024,876	+		Rv1786	0.24	-1.5
2,024,876	+		Rv1786	0.24	-0.3
2,024,876	+		Rv1786	0.24	+1.1
2,024,877	-		Rv1786	0.24	+0.2
2,024,877	-		Rv1786	0.24	+0.7
2,024,877	-		Rv1786	0.24	-0.0
2,024,877	-		Rv1786	0.24	-0.2
2,024,877	-		Rv1786	0.24	+0.5
2,024,877	-		Rv1786	0.24	+1.3
2,024,877	-		Rv1786	0.24	-0.3
2,025,045	+				+0.9
2,025,078	+				+0.1
2,025,092	-				-0.3
2,025,130	+				+0.2
2,025,130	+				+0.2
2,025,131	-				-0.4
2,025,131	-				-0.3
2,025,143	-				-0.6
2,025,143	-				+0.1
2,025,186	-				+0.4
2,025,187	+				+0.2