Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1132

Experiment: 7H9 with Ofloxacin 0.8 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ofloxacin 0.8 ug/mL
1,256,810	+		Rv1131	0.57	+0.1
1,256,811	-		Rv1131	0.57	-0.6
1,257,072	-		Rv1131	0.80	-0.0
1,257,199	+				-0.1
1,257,273	-				-1.3
1,257,312	-				-0.5
1,257,317	+				+0.0
1,257,615	-		Rv1132	0.17	+0.0
1,258,001	+		Rv1132	0.39	-0.2
1,258,002	-		Rv1132	0.39	-0.0
1,258,002	-		Rv1132	0.39	-0.2
1,258,639	+		Rv1132	0.76	+1.1
1,258,719	+		Rv1132	0.81	+0.6
1,258,762	+		Rv1132	0.83	-0.7
1,258,762	+		Rv1132	0.83	+1.0
1,258,950	-				+1.2
1,258,950	-				-0.6
1,258,950	-				-0.9