Experiment: 7H9 with Ofloxacin 0.8 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0863 and Rv0864 are separated by 9 nucleotides Rv0864 and Rv0865 overlap by 4 nucleotides Rv0865 and Rv0866 overlap by 4 nucleotides Rv0866 and Rv0867c are separated by 17 nucleotides
Rv0863: Rv0863 - Conserved hypothetical protein, at 962,599 to 962,880
Rv0863
Rv0864: Rv0864 - Probable molybdenum cofactor biosynthesis protein C 2 MoaC2, at 962,890 to 963,393
Rv0864
Rv0865: Rv0865 - Probable molybdopterin biosynthesis Mog protein, at 963,390 to 963,872
Rv0865
Rv0866: Rv0866 - Probable molybdenum cofactor biosynthesis protein E2 MoaE2 (molybdopterin converting factor large subunit) (molybdopterin [MPT] converting factor, subunit 2), at 963,869 to 964,294
Rv0866
Rv0867c: Rv0867c - Possible resuscitation-promoting factor RpfA, at 964,312 to 965,535
Rv0867c
Position (kb) 963
964
965 Strain fitness (log2 ratio) -2
-1
0
1
2 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.024 kb on - strand, within Rv0864 at 963.028 kb on - strand, within Rv0864 at 963.111 kb on + strand, within Rv0864 at 963.111 kb on + strand, within Rv0864 at 963.166 kb on - strand, within Rv0864 at 963.295 kb on + strand, within Rv0864 at 963.295 kb on + strand, within Rv0864 at 963.449 kb on + strand, within Rv0865 at 963.554 kb on - strand, within Rv0865 at 963.657 kb on + strand, within Rv0865 at 963.657 kb on + strand, within Rv0865 at 963.793 kb on + strand, within Rv0865 at 963.794 kb on - strand, within Rv0865 at 963.794 kb on - strand, within Rv0865 at 964.022 kb on + strand, within Rv0866 at 964.022 kb on + strand, within Rv0866 at 964.023 kb on - strand, within Rv0866 at 964.074 kb on + strand, within Rv0866 at 964.075 kb on - strand, within Rv0866 at 964.325 kb on + strand at 964.325 kb on + strand at 964.325 kb on + strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.326 kb on - strand at 964.401 kb on + strand at 964.402 kb on - strand at 964.402 kb on - strand at 964.403 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ofloxacin 0.8 ug/mL remove 963,023 + Rv0864 0.26 +1.9 963,023 + Rv0864 0.26 -0.2 963,023 + Rv0864 0.26 +0.5 963,023 + Rv0864 0.26 +0.4 963,024 - Rv0864 0.27 +0.8 963,028 - Rv0864 0.27 -1.2 963,111 + Rv0864 0.44 -0.3 963,111 + Rv0864 0.44 -2.1 963,166 - Rv0864 0.55 -0.7 963,295 + Rv0864 0.80 +1.4 963,295 + Rv0864 0.80 -0.5 963,449 + Rv0865 0.12 +1.1 963,554 - Rv0865 0.34 +0.4 963,657 + Rv0865 0.55 -0.3 963,657 + Rv0865 0.55 +0.1 963,793 + Rv0865 0.83 -1.5 963,794 - Rv0865 0.84 -0.1 963,794 - Rv0865 0.84 +0.4 964,022 + Rv0866 0.36 +0.9 964,022 + Rv0866 0.36 -0.0 964,023 - Rv0866 0.36 -0.3 964,074 + Rv0866 0.48 +0.4 964,075 - Rv0866 0.48 -0.1 964,325 + -2.4 964,325 + +0.1 964,325 + -1.1 964,326 - +0.6 964,326 - -0.7 964,326 - -1.8 964,326 - -0.8 964,326 - -0.0 964,326 - +0.1 964,326 - +0.7 964,326 - +0.2 964,401 + +2.4 964,402 - +0.3 964,402 - -0.8 964,403 + +1.0
Or see this region's nucleotide sequence