Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3921c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
4,408,056	+		Rv3919c	0.78	-1.1
4,408,071	+		Rv3919c	0.80	-0.3
4,408,072	-		Rv3919c	0.81	+0.5
4,408,077	-		Rv3919c	0.81	+0.5
4,408,203	+				+0.9
4,408,203	+				+0.7
4,408,203	+				+0.4
4,408,204	-				-1.8
4,408,299	+				-1.4
4,408,300	-				-1.0
4,408,336	-				-1.1
4,408,553	+		Rv3920c	0.39	-1.0
4,408,554	-		Rv3920c	0.39	-1.6
4,408,554	-		Rv3920c	0.39	+0.0
4,410,241	-		Rv3922c	0.52	-1.2
4,410,265	-		Rv3922c	0.58	-0.2
4,410,272	-		Rv3922c	0.60	+0.8
4,410,272	-		Rv3922c	0.60	-1.2
4,410,272	-		Rv3922c	0.60	+0.6
4,410,278	-		Rv3922c	0.62	+0.4
4,410,368	-		Rv3922c	0.87	+0.8
4,410,770	-				-1.2