Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3498c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
3,916,076	+		Rv3497c	0.18	+0.9
3,916,107	+		Rv3497c	0.21	+0.6
3,916,107	+		Rv3497c	0.21	-0.7
3,916,108	-		Rv3497c	0.21	-2.1
3,916,109	+		Rv3497c	0.21	-0.7
3,916,109	+		Rv3497c	0.21	-1.5
3,916,110	-		Rv3497c	0.21	-1.5
3,916,177	-		Rv3497c	0.27	+0.9
3,916,497	+		Rv3497c	0.57	+0.4
3,916,550	+		Rv3497c	0.62	-0.5
3,916,551	-		Rv3497c	0.62	+0.2
3,916,767	-		Rv3497c	0.82	-0.7
3,916,767	-		Rv3497c	0.82	-0.7
3,916,808	+		Rv3497c	0.86	+2.3
3,916,818	-		Rv3497c	0.87	-1.1
3,916,935	+				-0.3
3,916,948	-				+0.2
3,917,055	+		Rv3498c	0.10	-0.6
3,917,103	+		Rv3498c	0.15	+2.3
3,917,103	+		Rv3498c	0.15	-0.1
3,917,103	+		Rv3498c	0.15	-2.2
3,917,391	-		Rv3498c	0.42	-0.0
3,917,715	+		Rv3498c	0.73	+0.7
3,917,716	-		Rv3498c	0.73	-2.0
3,917,724	+		Rv3498c	0.74	-0.9
3,917,725	-		Rv3498c	0.74	-0.8
3,917,865	+		Rv3498c	0.87	-0.0
3,917,866	-		Rv3498c	0.87	-1.2
3,918,086	+				-0.8
3,918,227	+		Rv3499c	0.19	-1.9
3,918,227	+		Rv3499c	0.19	-0.7
3,918,227	+		Rv3499c	0.19	-1.3
3,918,228	-		Rv3499c	0.19	-0.4
3,918,228	-		Rv3499c	0.19	+1.9
3,918,276	+		Rv3499c	0.23	-0.7
3,918,435	-		Rv3499c	0.36	+0.9
3,918,441	+		Rv3499c	0.37	+0.3
3,918,442	-		Rv3499c	0.37	-0.7
3,918,445	-		Rv3499c	0.37	-1.9
3,918,463	+		Rv3499c	0.39	-1.2
3,918,464	-		Rv3499c	0.39	-1.2
3,918,563	+		Rv3499c	0.47	-0.5
3,918,563	+		Rv3499c	0.47	-0.2
3,918,563	+		Rv3499c	0.47	-0.9
3,918,614	-		Rv3499c	0.51	+0.3
3,918,746	-		Rv3499c	0.62	-2.4