Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3103c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
3,470,566	-		Rv3101c	0.87	-1.5
3,470,660	-				-1.3
3,470,831	-		Rv3102c	0.22	+0.8
3,470,848	-		Rv3102c	0.24	-1.1
3,471,078	-		Rv3102c	0.58	-2.2
3,471,385	+				+0.1
3,471,441	+				-0.5
3,471,442	-				+0.9
3,471,657	+		Rv3103c	0.56	+0.6
3,471,657	+		Rv3103c	0.56	+0.3
3,471,658	-		Rv3103c	0.56	-0.9
3,471,733	+		Rv3103c	0.73	+0.4
3,471,735	+		Rv3103c	0.74	+0.4
3,471,735	+		Rv3103c	0.74	+0.1
3,471,735	+		Rv3103c	0.74	+0.3
3,471,736	-		Rv3103c	0.74	-0.3
3,471,736	-		Rv3103c	0.74	+1.2
3,471,736	-		Rv3103c	0.74	+0.6
3,471,745	-		Rv3103c	0.76	-0.4
3,471,745	-		Rv3103c	0.76	+2.0
3,472,481	-		Rv3104c	0.68	+0.6
3,472,495	+		Rv3104c	0.69	+0.4
3,472,496	-		Rv3104c	0.69	+0.8
3,472,534	-		Rv3104c	0.74	+0.4
3,472,727	+				+2.4
3,472,728	-				-0.0
3,472,744	-				-0.5
3,472,780	-				+0.0