Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2918c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
3,227,464	-		Rv2917	0.59	-0.2
3,227,464	-		Rv2917	0.59	-1.3
3,227,558	-		Rv2917	0.64	-1.0
3,227,558	-		Rv2917	0.64	-0.3
3,227,703	+		Rv2917	0.71	-0.0
3,227,905	+		Rv2917	0.82	+1.0
3,228,395	-				-1.1
3,228,548	-		Rv2918c	0.12	+1.7
3,228,593	+		Rv2918c	0.14	+0.7
3,228,774	-		Rv2918c	0.21	+1.4
3,228,845	+		Rv2918c	0.24	-1.0
3,228,877	+		Rv2918c	0.26	-1.1
3,228,918	+		Rv2918c	0.27	+1.7
3,228,919	-		Rv2918c	0.27	+1.0
3,229,136	+		Rv2918c	0.36	+1.3
3,229,529	+		Rv2918c	0.53	-0.7
3,229,533	-		Rv2918c	0.53	+0.3
3,229,533	-		Rv2918c	0.53	-0.2
3,230,940	+		Rv2919c	0.60	-0.6
3,231,103	+				+0.5
3,231,103	+				+0.0
3,231,104	-				-0.1
3,231,105	+				-1.8
3,231,105	+				-0.7
3,231,106	-				+0.5
3,231,362	+		Rv2920c	0.20	+0.1
3,231,646	-		Rv2920c	0.40	-0.7