Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2758c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
3,069,644	+		Rv2756c	0.73	-0.4
3,069,645	-		Rv2756c	0.73	-0.4
3,069,819	-		Rv2756c	0.84	+1.1
3,069,936	-				+1.0
3,069,936	-				+0.9
3,069,972	-				-0.5
3,070,247	-		Rv2757c	0.18	-1.9
3,070,390	+		Rv2757c	0.53	+1.9
3,070,747	+		Rv2758c	0.61	+0.7
3,070,826	+				+0.1
3,070,901	+				+0.8
3,070,961	-		Rv2759c	0.22	-0.1
3,070,966	+		Rv2759c	0.23	-0.1
3,070,966	+		Rv2759c	0.23	+0.2
3,070,966	+		Rv2759c	0.23	-0.5
3,070,966	+		Rv2759c	0.23	-1.5
3,070,966	+		Rv2759c	0.23	+0.1
3,070,967	-		Rv2759c	0.23	+1.3
3,070,967	-		Rv2759c	0.23	-0.4
3,071,015	-		Rv2759c	0.35	+0.3
3,071,158	+		Rv2759c	0.71	+0.8
3,071,159	-		Rv2759c	0.72	-1.2
3,071,159	-		Rv2759c	0.72	+0.1
3,071,292	+				-0.3
3,071,293	-				-0.4
3,071,525	-				+1.5
3,071,525	-				-0.5
3,071,525	-				+1.8
3,071,525	-				-0.1