Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2462c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
2,763,887	-				-0.7
2,763,887	-				-0.1
2,764,388	-		Rv2462c	0.35	+1.6
2,764,388	-		Rv2462c	0.35	+0.3
2,764,536	+		Rv2462c	0.46	-0.5
2,764,853	+		Rv2462c	0.69	-0.1
2,764,854	-		Rv2462c	0.69	+0.4
2,764,857	+		Rv2462c	0.69	-0.6
2,764,857	+		Rv2462c	0.69	+1.7
2,764,857	+		Rv2462c	0.69	-0.5
2,764,994	-		Rv2462c	0.79	+0.5
2,765,198	-				-0.9
2,765,516	+				+0.2
2,765,516	+				-0.1
2,765,536	+				-0.9
2,765,536	+				-0.8
2,765,536	+				-1.0
2,765,536	+				-0.5
2,765,704	+				+0.3
2,766,129	+		Rv2463	0.40	-0.3
2,766,189	-		Rv2463	0.45	-0.7
2,766,201	+		Rv2463	0.46	+0.5
2,766,202	-		Rv2463	0.46	-0.6
2,766,287	-		Rv2463	0.53	-1.9