Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2149c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
2,407,169	-		Rv2148c	0.42	-1.0
2,407,169	-		Rv2148c	0.42	+0.2
2,407,377	-		Rv2148c	0.69	+2.3
2,407,488	+		Rv2148c	0.83	+1.3
2,407,860	+		Rv2149c	0.32	+1.2
2,407,861	-		Rv2149c	0.32	-0.0
2,407,861	-		Rv2149c	0.32	+1.3
2,408,072	-		Rv2149c	0.60	-0.4
2,408,072	-		Rv2149c	0.60	-0.5
2,408,107	+		Rv2149c	0.64	+3.3
2,408,108	-		Rv2149c	0.65	+1.7
2,408,338	+				+0.9
2,408,362	+				-0.1
2,408,362	+				+0.7