Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1730c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
1,954,878	-		Rv1729c	0.26	-1.0
1,955,005	-		Rv1729c	0.40	-2.3
1,955,005	-		Rv1729c	0.40	-0.3
1,955,006	+		Rv1729c	0.40	+2.0
1,955,006	+		Rv1729c	0.40	-0.5
1,955,531	-				+0.3
1,955,693	+				-0.3
1,956,333	+		Rv1730c	0.41	+1.3
1,956,693	-		Rv1730c	0.64	+0.9
1,956,986	+		Rv1730c	0.83	-0.6
1,957,370	-				-1.2
1,957,631	+				-2.3
1,957,676	+				+0.1
1,958,025	+		Rv1731	0.22	+1.8
1,958,063	+		Rv1731	0.25	-0.7
1,958,109	+		Rv1731	0.28	-0.8
1,958,109	+		Rv1731	0.28	-0.3
1,958,151	+		Rv1731	0.30	+0.2
1,958,152	-		Rv1731	0.31	-1.4
1,958,238	+		Rv1731	0.36	-0.0