Experiment: 7H9 with Ethionamide 0.1 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0862c and Rv0863 overlap by 14 nucleotides Rv0863 and Rv0864 are separated by 9 nucleotides Rv0864 and Rv0865 overlap by 4 nucleotides Rv0865 and Rv0866 overlap by 4 nucleotides
Rv0862c: Rv0862c - Conserved protein, at 960,342 to 962,612
Rv0862c
Rv0863: Rv0863 - Conserved hypothetical protein, at 962,599 to 962,880
Rv0863
Rv0864: Rv0864 - Probable molybdenum cofactor biosynthesis protein C 2 MoaC2, at 962,890 to 963,393
Rv0864
Rv0865: Rv0865 - Probable molybdopterin biosynthesis Mog protein, at 963,390 to 963,872
Rv0865
Rv0866: Rv0866 - Probable molybdenum cofactor biosynthesis protein E2 MoaE2 (molybdopterin converting factor large subunit) (molybdopterin [MPT] converting factor, subunit 2), at 963,869 to 964,294
Rv0866
Position (kb) 962
963 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 961.729 kb on - strand, within Rv0862c at 962.700 kb on + strand, within Rv0863 at 962.700 kb on + strand, within Rv0863 at 962.719 kb on + strand, within Rv0863 at 962.719 kb on + strand, within Rv0863 at 962.848 kb on + strand, within Rv0863 at 962.849 kb on - strand, within Rv0863 at 962.849 kb on - strand, within Rv0863 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.024 kb on - strand, within Rv0864 at 963.028 kb on - strand, within Rv0864 at 963.111 kb on + strand, within Rv0864 at 963.111 kb on + strand, within Rv0864 at 963.166 kb on - strand, within Rv0864 at 963.295 kb on + strand, within Rv0864 at 963.295 kb on + strand, within Rv0864 at 963.449 kb on + strand, within Rv0865 at 963.554 kb on - strand, within Rv0865 at 963.657 kb on + strand, within Rv0865 at 963.657 kb on + strand, within Rv0865 at 963.793 kb on + strand, within Rv0865 at 963.794 kb on - strand, within Rv0865 at 963.794 kb on - strand, within Rv0865
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ethionamide 0.1 ug/mL remove 961,729 - Rv0862c 0.61 -1.0 962,700 + Rv0863 0.36 -2.1 962,700 + Rv0863 0.36 +0.2 962,719 + Rv0863 0.43 -1.0 962,719 + Rv0863 0.43 +0.1 962,848 + Rv0863 0.88 -0.8 962,849 - Rv0863 0.89 -1.3 962,849 - Rv0863 0.89 +0.7 963,023 + Rv0864 0.26 +0.7 963,023 + Rv0864 0.26 -1.0 963,023 + Rv0864 0.26 +0.6 963,023 + Rv0864 0.26 +0.4 963,024 - Rv0864 0.27 -0.6 963,028 - Rv0864 0.27 -0.6 963,111 + Rv0864 0.44 -0.2 963,111 + Rv0864 0.44 -0.6 963,166 - Rv0864 0.55 -0.8 963,295 + Rv0864 0.80 +0.4 963,295 + Rv0864 0.80 -2.9 963,449 + Rv0865 0.12 -0.0 963,554 - Rv0865 0.34 +0.3 963,657 + Rv0865 0.55 -0.9 963,657 + Rv0865 0.55 +0.2 963,793 + Rv0865 0.83 -0.0 963,794 - Rv0865 0.84 -0.9 963,794 - Rv0865 0.84 -1.3
Or see this region's nucleotide sequence